Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0841 ATGGAGTTTCGGGAAACAGAGAAAAAGAAGGTTAACTCAGAGGTTCCATGGATACCCACCACACCTTTTAAGCCCATTGCACAAAGACCAGCGCAGATCTGCACTTCTGGAGAGAGAAATCAGCTGAATTCTCATTTCAATGGAGAATTTGCATCTCTAGAATCTTCGGCAGGTGGAAATGTTAACCACGAGTCAGAATCTGTGGCGGGAACATCAAACATTGGTCATGACAATGCCAGAACTCGGGTACAGGTGTCGTTCGAAGATGTTCCTGGTCCGAGTAATAGTTTTGCTGAGCTATTGGCTCAGGCAGGAGCTCCTTCCGCATACTGTAATTCAAGATATGATTTTTTGGATAACCAATTTGTTCCTGGTGTGTGGAACTCGCAGTTCGACCAAAGCTATGCATTACTTGGCAATCACAATCTGTATCAGCAACAGCCGTATACCAATTTCATTCATGACAATTACCAAGATCCTCAAGGCACATCATACATGGCTTACTGTGGCCTGACCGATTCTCAGGTTGCGCTGCCTCCAGAAAATGTCGTCACAGCAAAAGACAAACAAGTTGTGGAGACACAGATTTGTACGGAACAAATGAATCAAAGGGAAGATGAGGATGATGCCTCGGCCACAATGTGCGACAAATCACACAACAAACTCTATGATCCTGCTGTTGTAGACTTGACTGCTATTCCTACACCTTGCAAGGAGGATAATAACCACAATAAGGAAATACACCATGTTATTGATCTTAATGAAATACCCCAAACAAAACCGAAAAGAAGAAAGCACCGCCCCAAGGTCATAAAAGAAGGAAAGCCGAAAAAAACCAGGAAGACGACCACTCCGAAGCCTGATCAATCAAAAGAAAACTCAACTCAAAAGAGGAAGTATGTCAGAAAGAAAGACTTAAACACAACTCCAGCAGAAGTGACAGGGGAATGCACTGAATCGTTAATAACCGAGTCTGCCAAAAAGACGTGTAGAAGGTCCTTATACTTTGAGATACCAGATCAACCAAGAGATGGAAACTCTGCATGCAGAGAAGAAAATGCAACTATGCGGTTTGGTGGCGAAACTGGCATAGAGGTCCAGGAAACGCAAGCTCTAAATAATTACATGTCATCACGAGAAGATGCACAAGCCTCCACCAGTAACGGAAAACTTTCGAGTAACGGATCACAAGAAGTAGGTTCTAAGAGAAAACCTTACGGTGCCATTAAGCAGGCAGACAACGGCAGCGTTAACCTAATTGGGTCCCAATATAATTTATTGCAGGCTTACCAGTCAAGGTATTGGGTTCAATTTCCAAATGTCCAGAAGAAAAGGAGAAGTGAAAAGGGGAAATTTTCTAACCCATCAAATGCATCTTCCATGACTGCTACAAAAGATGTTCAACTAGCAACATGCTCTGAAGAAAATGCCAGATCATATCAAGATGCATCAACTTCTAACGGCTGGACTTCTGCTTCTGCTTCTGAATATGAAACAGCGAAACTCCTAACCATGCTCAGAGCCACAGAAAAAGCTACCTGTGATAAATCGCAATCGCTTGAGTACAATTTATTTTCAGGTCAGAGCAGACCAACCAAAAAAAGATCAAGAGTCACAAACAGAGCTCATGATTACACTTCACTGACCATAGTCAGAAACTGTGATGCCAAACTTACTAATATTGCAAACCGAAGCAGTTCTGATAGAAAAACAGTTGAGGATGCACAAAGACCACAAACAGGCATTGATGCTCTAGTCGCGGAGATGCGTGCATCACTCACAAAAAAGAAACGGAGTAAAAAGAGAACTGCTCCAATCAGTTCCGTATATTCTAGCAGAGATGAAATGCAACAGCATCTTCCTTTGCACAGCTCATTAGGTGTTGCTCGTGGAGAGAGCTGGAAAAGCATATATACTGTGGACACATTAACACAGCAGTTTAGCCAGCTAAACATATATAGAGAAGCTAGAGAGCTTGTGTTGTATGGCCAGAATGCACTTGTCTCTTACAAGCAGAAAACTGAAAAACGCAAAGGCCGGCGGGTTCATGAATATGGCACCATGATTCCCTACGAAGGCGTGTTTGATCCCATCAAGAAACAACGCCCACGACCTAAAGTTGATCTGGATGAGGAAACTAATAAAGTGTGGAAGCTTCTGATGTTGGATATAAACAGTCATGGGGTTGATGGAACAGATGAAGACAAGGCCAAATGGTGGGAAAATGAACGAAATGTTTTCCGAGGACGAGCAGAGTCATTTATTGCACGGATGCATCTTGTACAAGGTGACAGGCGCTTTTCGCGATGGAAAGGATCGGTGGTGGATTCAGTAGTTGGAGTTTTCCTCACTCAAAATGTCTCGGACCATCTTTCTAGTTCTGCATTCATGTCCCTTGCTGCTCGATTTCCTGTAAAGCCAAGCAGCAAGTACGATGCATGCCATGATGAAAGTGCAAGTATGATAGTCAACTCACCAGAGGTGCAGATTGTGGAACCAGAAGAAAATGCAAAGCTGGAAGAAATATTGAATCAATCTGTTCATGAATTGAGTTCTATGACAAAAGACATCATTGAACATTCTGCAGAAAGAGAAACAGTTGACAGCAACAGCATTGATTCCTGTGGAACTACTGGAAGCTTAAAAGATGAATCAAATTGTAAGCTGTTGGAACCTGCTCAAAGAAATATTAGCGAACATAGTACAATGGGATTTGTTAGTCCTGTGACTGGGGAAGGACAAGAAAATTCATGTAAGGGGGGTGTTAGGAAAGAGCTAAATGCTTTATTTTCATCCCATTGCTCCATTGTTACATCTCAATTGTCTGGAGATCTTTCCATTGATCAAAATCCTGAGAAGATAGGATCAGTCTCAGACAGCAACACAGAAGTAGAAGATCGGCTAAGCACAGCCGAATACAATGTTTCCAACAGGACTTCTTTCAGTAATCTTTTAGGAATGGCAAGTTCGACGCAGTTACATGAAGTTAACAGTCAGAGTAACAATCCAACTGAGAATTTGAGAGATTCATATGGTCAGCCTGTAGCTATGAGGCATGACAATCTGGAGGAGAACTTGGAAAAATCAAATGTTAATCAAAGCTACTTAGAAGAAATCATGACACAGTGCAATGACTATAATTTGAAAATGACCCCCAACTCTGGAGTTCTTGAAGTCAACTGCTATAATCCCGTCAATGTCGAAGCCTCGTCAAGTGGCTCCTCAAAGAATAAAAATGAAGATAACATAAGCTTGAGTTCTCCAGCAGAGTCTCACAGCATGCTATCCCAAGCCCATCAGCAGCATAGTGATCACAAGCAGCACGAGGCTTTCCACATTTCTGGACAAAGTCAAGATCTTATGCCGAAATCAAAGGAATCAGATTCTTGTGACCACAGCTATGCTATTACAAATGAAAACAGTAAGTTAGAATCTGCTCCTGTAAAATCAAAAGGCAAGAAAGAAAAAAAGGATAGCTTCAATTGGGATAGTTTAAGAGTACAGGCGCTAGCTACAGCAGGGGAAAGAGAAAAGACAGAAAGCACCAAGGACTCTTTGGACTGGGACGCCGTGAGGCGTGCAAACGTCAATGAAATTGCTGATGCAATTAAAGAACGGGGCATGAACAACATGCTTGCTGAACGTATTCAGAGTTTCCTGAATCTACTCGTTGATAAACACGGGGGTATAGATCTCGAGTGGTTGAGGGATGTTCCACCTGACCAAGCAAAAGAATTCTTGCTCAGCATAAGAGGATTGGGATTGAAAAGTGTGGAGTGCGTGCGACTGTTAACACTGCACCATCTTGCTTTCCCGGTGGACACAAATGTTGGGCGCATTGCAGTACGCTTGGGATGGGTACCTCTCCAGCCACTGCCGGAATCATTACAGTTGCATCTTCTAGAATTGTACCCGGTGTTGGAATCCATACAAAAGTATCTCTGGCCCCGGCTGTGCAAGCTTGATCAAAGAACATTGTACGAGCTGCATTACCAGCTGATAACATTTGGAAAGGTCTTCTGTACAAAAAGCAAACCAAATTGTAATGCATGTCCAATGAGAGGGGAATGTAGACACTTTGCAAGTGCTTTTGCAAGTGCAAGGCTTTCCCTCCCAGGACCGGAGCAGAAGAATTTAGTTATTGCAACTGGAAACAATGCAACTGATCAGAACCCATCAGTAATCATTGATCATTCACCCTTGCCTCTCCCAGAACCGGAGCAAAAGAATATAGATATGACAACTGGAAACAATACAACTGATCAGAACCCCTCAGTAATCATCGATCAGTTGCCCTTGCCTCTCCCAGAACCAGGTCAGAAGAATATAGATATGACAACTGGAAACAATACAACTGATCAGAACCCCTCAGTAATCATCGATCAGTTGCCCTTGCCTCTCCCAGAACCGGGTCAGAAGAATATAGATATGACAACTGGAAACAATACAACTGATCAGAACCCGTCAGTAATCATCAATCAGTTGCCCTTGTCTCTCCCTGAAAACACAAACCAAGCTGAAGAACTTCTGCAAACAGTTGTGATCAGGCAACATGAAACAAACTCTGAAATCAACATCTGCCAACCAATTATAGAAGAGCCAGCATCTCCAGAGCCAGAATGCTCCCATGTATCCGAAAATGATATAGAGGATGCTTTCTATGAGGAATCCGATGAAATTCCAACCATCAAACTAGACCTAGAAGAGTTCACTGTGAATTTACAAAATTATATGCAAACAAACATGGAACTTCAAGAAGGTGAAATGTCAAAGGCCTTGGTTGCTCTAAATCAAGAAGCTGCTTACATTCCTACACCGAAGCTGAAGAACGTGAGCCGGTTGCGCACAGAGCATTCAGTTTATGAACTCCCAGATTCACATTGTCTTCTGGAAGGGTGGGAAGTGAGGGAACCTGATGATCCGGGCAAATACCTTCTAGCTATATGGACCCCAGGCGAGACAGCAAATTCCATAGAGCCACCGGAAAGAAAGTGCAGCACTCAGGGCTCTGGCCAGCTCTGTAATGAGGAGGAATGTTTTTCATGCAACAGCTTCCGTGAAGCAAGTTTGCAGATGGTTCGAGGGACAATCCTGATACCATGTCGAACAGCAATGAGAGGGAGCTTTCCGCTAAACGGAACCTATTTTCAAGTCAATGAGGTTTTCGCAGACCATGAATCAAGTCTTAACCCAATTAGCGTTCCCAGAAGTTGGATATGGAACCTCAATAGGAGAACAGTACACTTCGGAACCTCCATTCCATCCATATTCAAAGGTTTATCAACACAAGAAATTCAACAGTGCTTCTGGAGAGGGTTTGTTTGTGTGCGAGGATTTGACAGGCAAACACGAGCACCCCGTCCTCTAAAGGCTAGACTACATTTCCCAGCAAGCAAGCTGGCCAAGAACAAGGAGCAGGCCAAGAAAGACGCAAAAGCTGCAAACTCGCAAGGATTGAATTTGAAATCAAATACAGAACAGCCAGAACTTCTCGCCAGCATTCCCAACTTGCAGCAGAACGGCGGATCCTGA 5532 0.4326 MEFRETEKKKVNSEVPWIPTTPFKPIAQRPAQICTSGERNQLNSHFNGEFASLESSAGGNVNHESESVAGTSNIGHDNARTRVQVSFEDVPGPSNSFAELLAQAGAPSAYCNSRYDFLDNQFVPGVWNSQFDQSYALLGNHNLYQQQPYTNFIHDNYQDPQGTSYMAYCGLTDSQVALPPENVVTAKDKQVVETQICTEQMNQREDEDDASATMCDKSHNKLYDPAVVDLTAIPTPCKEDNNHNKEIHHVIDLNEIPQTKPKRRKHRPKVIKEGKPKKTRKTTTPKPDQSKENSTQKRKYVRKKDLNTTPAEVTGECTESLITESAKKTCRRSLYFEIPDQPRDGNSACREENATMRFGGETGIEVQETQALNNYMSSREDAQASTSNGKLSSNGSQEVGSKRKPYGAIKQADNGSVNLIGSQYNLLQAYQSRYWVQFPNVQKKRRSEKGKFSNPSNASSMTATKDVQLATCSEENARSYQDASTSNGWTSASASEYETAKLLTMLRATEKATCDKSQSLEYNLFSGQSRPTKKRSRVTNRAHDYTSLTIVRNCDAKLTNIANRSSSDRKTVEDAQRPQTGIDALVAEMRASLTKKKRSKKRTAPISSVYSSRDEMQQHLPLHSSLGVARGESWKSIYTVDTLTQQFSQLNIYREARELVLYGQNALVSYKQKTEKRKGRRVHEYGTMIPYEGVFDPIKKQRPRPKVDLDEETNKVWKLLMLDINSHGVDGTDEDKAKWWENERNVFRGRAESFIARMHLVQGDRRFSRWKGSVVDSVVGVFLTQNVSDHLSSSAFMSLAARFPVKPSSKYDACHDESASMIVNSPEVQIVEPEENAKLEEILNQSVHELSSMTKDIIEHSAERETVDSNSIDSCGTTGSLKDESNCKLLEPAQRNISEHSTMGFVSPVTGEGQENSCKGGVRKELNALFSSHCSIVTSQLSGDLSIDQNPEKIGSVSDSNTEVEDRLSTAEYNVSNRTSFSNLLGMASSTQLHEVNSQSNNPTENLRDSYGQPVAMRHDNLEENLEKSNVNQSYLEEIMTQCNDYNLKMTPNSGVLEVNCYNPVNVEASSSGSSKNKNEDNISLSSPAESHSMLSQAHQQHSDHKQHEAFHISGQSQDLMPKSKESDSCDHSYAITNENSKLESAPVKSKGKKEKKDSFNWDSLRVQALATAGEREKTESTKDSLDWDAVRRANVNEIADAIKERGMNNMLAERIQSFLNLLVDKHGGIDLEWLRDVPPDQAKEFLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQRTLYELHYQLITFGKVFCTKSKPNCNACPMRGECRHFASAFASARLSLPGPEQKNLVIATGNNATDQNPSVIIDHSPLPLPEPEQKNIDMTTGNNTTDQNPSVIIDQLPLPLPEPGQKNIDMTTGNNTTDQNPSVIIDQLPLPLPEPGQKNIDMTTGNNTTDQNPSVIINQLPLSLPENTNQAEELLQTVVIRQHETNSEINICQPIIEEPASPEPECSHVSENDIEDAFYEESDEIPTIKLDLEEFTVNLQNYMQTNMELQEGEMSKALVALNQEAAYIPTPKLKNVSRLRTEHSVYELPDSHCLLEGWEVREPDDPGKYLLAIWTPGETANSIEPPERKCSTQGSGQLCNEEECFSCNSFREASLQMVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHESSLNPISVPRSWIWNLNRRTVHFGTSIPSIFKGLSTQEIQQCFWRGFVCVRGFDRQTRAPRPLKARLHFPASKLAKNKEQAKKDAKAANSQGLNLKSNTEQPELLASIPNLQQNGGS* 1844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0841 1843 MobiDBLite consensus disorder prediction 243 307 - -
Psa3g0841 1843 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 1467 1809 IPR044811 GO:0019104|GO:0035514|GO:0080111
Psa3g0841 1843 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 289 355 IPR044811 GO:0019104|GO:0035514|GO:0080111
Psa3g0841 1843 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 1401 1438 IPR044811 GO:0019104|GO:0035514|GO:0080111
Psa3g0841 1843 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 1121 1405 IPR044811 GO:0019104|GO:0035514|GO:0080111
Psa3g0841 1843 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 385 1103 IPR044811 GO:0019104|GO:0035514|GO:0080111
Psa3g0841 1843 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 5 289 IPR044811 GO:0019104|GO:0035514|GO:0080111
Psa3g0841 1843 SUPERFAMILY DNA-glycosylase 749 1362 IPR011257 GO:0003824|GO:0006281
Psa3g0841 1843 MobiDBLite consensus disorder prediction 54 77 - -
Psa3g0841 1843 MobiDBLite consensus disorder prediction 1816 1843 - -
Psa3g0841 1843 MobiDBLite consensus disorder prediction 444 464 - -
Psa3g0841 1843 PANTHER ROS1, PUTATIVE-RELATED 1467 1809 - -
Psa3g0841 1843 PANTHER ROS1, PUTATIVE-RELATED 1401 1438 - -
Psa3g0841 1843 PANTHER ROS1, PUTATIVE-RELATED 289 355 - -
Psa3g0841 1843 PANTHER ROS1, PUTATIVE-RELATED 385 1103 - -
Psa3g0841 1843 PANTHER ROS1, PUTATIVE-RELATED 1121 1405 - -
Psa3g0841 1843 PANTHER ROS1, PUTATIVE-RELATED 5 289 - -
Psa3g0841 1843 MobiDBLite consensus disorder prediction 243 259 - -
Psa3g0841 1843 SMART ccc3 1340 1360 IPR003651 GO:0051539
Psa3g0841 1843 Coils Coil 1797 1817 - -
Psa3g0841 1843 MobiDBLite consensus disorder prediction 378 400 - -
Psa3g0841 1843 Pfam RRM in Demeter 1695 1795 IPR028925 -
Psa3g0841 1843 CDD ENDO3c 1187 1305 IPR003265 GO:0006284
Psa3g0841 1843 Gene3D Hypothetical protein; domain 2 1165 1261 - -
Psa3g0841 1843 MobiDBLite consensus disorder prediction 260 276 - -
Psa3g0841 1843 Pfam Permuted single zf-CXXC unit 1661 1691 IPR028924 -
Psa3g0841 1843 MobiDBLite consensus disorder prediction 1800 1843 - -
Psa3g0841 1843 Gene3D - 1262 1378 IPR023170 -
Psa3g0841 1843 MobiDBLite consensus disorder prediction 1069 1130 - -
Psa3g0841 1843 MobiDBLite consensus disorder prediction 1069 1098 - -
Psa3g0841 1843 SMART endo3end 1173 1339 IPR003265 GO:0006284
Psa3g0841 1843 MobiDBLite consensus disorder prediction 378 403 - -
Psa3g0841 1843 MobiDBLite consensus disorder prediction 277 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0841 Psa-Chr3 76108170 76119085 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0841 - - mtr:MTR_7g103680 2725.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0841 3 76108170 76119085 Psa3g0841 3 76108170 76119085 ECH