Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0789 ATGAGTTTGGATACTGTAAGAATGGCAACGTGTTTTGCACCTTCGAATTCTAGAAATTCAGCAGGAGTGTTGGCTGTTAATGGAGGAAGAAAGTTGTTAGAGAATCATCACATTCACATTAACAAACCCTGTTTCTTCAAAATTCATGAGAATAAGTGTCGATTTTTTAGCGGTAACAGAAAGTGCGGTTCGTTTCAAATGAAATCGACTGGTTTACCGAATTCCCATAGTATCGGTCACTATCATCATAGCAAAGATCCTTTTTTAGATCTTCATCCCGAAGTTTCAATGCTTAGAGGTGAAGGAAGCAACCCTGCTAGACAGAGAAAGGATACGTCGGGTGGAGATGTGGCGGAGAGCTTAGAAGACATTTCCATTCCAAGTAATTATAATGAAGCGAAGATTAAAGTTATTGGTGTTGGTGGTGGTGGGTCGAATGCGGTTAACCGGATGATTGAGAGTTCCATGAATGGTGTGGAGTTTTGGATTGTTAATACTGATGTTCAGGCTATGAGAATGTCGCCTGTTAATTCCGAGAACCGATTGCCAATTGGTCAAGAGCTTACACGGGGTCTTGGTGCTGGTGGTAACCCGGAGATTGGTATGAATGCTGCCAAAGAAAGCAAAGAATCAATACAAGAGGCGGTTTATGGAGCTGACATGGTCTTTGTTACTGCTGGAATGGGTGGAGGAACTGGCACTGGTGCAGCTCCAGTTATTGCTGGTATCACAAAGTCAATGGGTATACTAACTGTTGGTATTGTCACAACCCCTTTCTCATTTGAAGGACGGAGAAGGGCAGTTCAAGCACAAGAAGGAATTGCAGCCTTAAGAGATAATGTTGATACCCTGATAGTTATTCCAAATGATAAGTTGCTGACTGCAGTTTCTCAGTCTACCCCTGTAACTGAAGCATTCAATCTGGCTGATGATATTCTTCGACAAGGTGTTCGTGGCATTTCTGATATTATAACGATTCCTGGATTGGTGAATGTTGACTTTGCCGATGTTAGAGCTATAATGGCCAATGCAGGTTCTTCACTTATGGGGATAGGAACTGCAACTGGGAAAACACGGGCAAGAGATGCTGCATTAAATGCTATCCAGTCGCCCTTACTAGATATTGGTATTGAGAGAGCCACTGGAATTGTGTGGAACATAACTGGTGGAAGTGATCTGACATTGTTTGAGGTAAATGCTGCAGCAGAAGTCATATATGATCTTGTGGACCCTACGGCTAATTTAATATTCGGAGCAGTAATAGATCCATCGCTCAGTGGTCAAGTGAGCATAACATTGATTGCGACGGGATTTAAGCGTCAAGAGGAAAGTGAAGGGAGACCCGGACAGGCCAGTCAATTCACACAGGGAGATACCATGGTCAGTCGGCGAGCTTCCACTTTCACTGATGGCAGTTTGGTTGAGATCCCAGAATTCTTAAAGAAGAAAGGGCGCTTACGCTATCCAAGAGCTTAA 1476 0.4329 MSLDTVRMATCFAPSNSRNSAGVLAVNGGRKLLENHHIHINKPCFFKIHENKCRFFSGNRKCGSFQMKSTGLPNSHSIGHYHHSKDPFLDLHPEVSMLRGEGSNPARQRKDTSGGDVAESLEDISIPSNYNEAKIKVIGVGGGGSNAVNRMIESSMNGVEFWIVNTDVQAMRMSPVNSENRLPIGQELTRGLGAGGNPEIGMNAAKESKESIQEAVYGADMVFVTAGMGGGTGTGAAPVIAGITKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQEESEGRPGQASQFTQGDTMVSRRASTFTDGSLVEIPEFLKKKGRLRYPRA* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0789 491 Pfam Tubulin/FtsZ family, GTPase domain 134 295 IPR003008 GO:0005525
Psa3g0789 491 MobiDBLite consensus disorder prediction 447 461 - -
Psa3g0789 491 SMART Tubulin_C_4 330 447 IPR018316 -
Psa3g0789 491 Gene3D - 344 454 IPR037103 -
Psa3g0789 491 PRINTS Cell division protein FtsZ signature 221 241 IPR003008 GO:0005525
Psa3g0789 491 PRINTS Cell division protein FtsZ signature 249 270 IPR003008 GO:0005525
Psa3g0789 491 PRINTS Cell division protein FtsZ signature 312 334 IPR003008 GO:0005525
Psa3g0789 491 PRINTS Cell division protein FtsZ signature 335 356 IPR003008 GO:0005525
Psa3g0789 491 CDD FtsZ_type1 145 437 IPR000158 GO:0003924|GO:0005525
Psa3g0789 491 MobiDBLite consensus disorder prediction 442 461 - -
Psa3g0789 491 Gene3D Tubulin/FtsZ, GTPase domain 124 343 IPR036525 -
Psa3g0789 491 ProSitePatterns FtsZ protein signature 2. 220 241 IPR020805 GO:0005525
Psa3g0789 491 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 8 488 IPR045061 GO:0003924|GO:0005525
Psa3g0789 491 Hamap Cell division protein FtsZ [ftsZ]. 130 446 IPR000158 GO:0003924|GO:0005525
Psa3g0789 491 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 8 488 - -
Psa3g0789 491 SUPERFAMILY Tubulin nucleotide-binding domain-like 133 331 IPR036525 -
Psa3g0789 491 SMART Tubulin_4 134 328 IPR003008 GO:0005525
Psa3g0789 491 MobiDBLite consensus disorder prediction 100 120 - -
Psa3g0789 491 TIGRFAM ftsZ: cell division protein FtsZ 128 447 IPR000158 GO:0003924|GO:0005525
Psa3g0789 491 SUPERFAMILY Tubulin C-terminal domain-like 327 441 IPR008280 -
Psa3g0789 491 Pfam FtsZ family, C-terminal domain 345 439 IPR024757 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0789 Psa-Chr3 69842475 69854403 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0789 K03531 - gmx:100793382 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0789 3 69842475 69854403 Psa3g0789 3 69842475 69854403 ECH