Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0781 ATGACACGCACCCTCGCTATCTCTCATCGTTTCTCTCTCCTCCGTACCCTCCTCAATTTCATCTCCTCCAACCCTTGCACTTGCTCCCACGCCATTTTCTCTTGCCCCAAAACTGAATCCATTTTCCGTTTTGCAATTCATGCTTACTGTAAAGCTTCGAAATTTGATGACGCCCTTTTTGCATTTAACTGTATGAGGAGGTTAATTGATGGAAAACCGAGTGTTTCTCTTTGTAATATTTTGATTCATGGGTTTGTTAAATCTGGTAGATTTGATAGAGCTTTTGAGTTTTACAATGAGATGGTTAAGGATAGAGTTAAGCCTGATGTTTTTACTTTTAATATTTTGATTAGTGGTTATTGTAGGAATTTTAAGTTTGGTTCTGCATTGGAGATGTTTGATGAAATGCGGAAAATGGGGTGTCATCCAAATGTTGTTACTTTTAATACTTTGATTAAAGGGTTGTTTAGGGAATGTAGAGTTGATGAAGGGATTGGAATGGTTTATGAAATGATTGAATTGGGGTGTCAACTTTCCAATGTCACTTGTGAGATTTTGGTTGATGGGCTTTGTAAGGAAGGTCGGGTTTCGAAGGCGTGTGAGTTGTTAATGGAGTTATCTAAGAGAGAGGTTTTGCCTAAAGGATATGATTATTTTTTCTTGGTGGAAGTTTTGTGTGGGAATGGAGATGCTTTTAAAGCTTTGGATGTTATTTATGAGTTGTGGAGTAAAGGTTGTGTTCCTAGCTTAATTTCTTGTATTGTGATGATTGATGGTTTGAGAGAATTAGGGAAGACAGATGAGGCAATGAGATTGGTGGAAAAAATGCTTAAAGAGGAGGGCATGGTACTTGATGTTGTGACTTTCAATTATGTCCTTCAAGATCTTTGCGATGCGGGAAGGACTGAAGAGGCCAATAGGTTAAGATTACTGGCTTCGAGCAAGGGTTTGGAACCCGATGGCATGACTTATAAAATTCTGGTTACTGGGTACAGAGGAGAGGGAAATCGAACGGATGGAGAGTTGGTAGTAAATGAAATGTTGGATAGGGGGTTTATACCTGATCTTGCTTCATATAATAAGCTGATGGATGGACTCTCTAATTGTCAACGCCTGAGGCGTTATCAAATGAACAAAATTGGCAGCTGA 1149 0.3908 MTRTLAISHRFSLLRTLLNFISSNPCTCSHAIFSCPKTESIFRFAIHAYCKASKFDDALFAFNCMRRLIDGKPSVSLCNILIHGFVKSGRFDRAFEFYNEMVKDRVKPDVFTFNILISGYCRNFKFGSALEMFDEMRKMGCHPNVVTFNTLIKGLFRECRVDEGIGMVYEMIELGCQLSNVTCEILVDGLCKEGRVSKACELLMELSKREVLPKGYDYFFLVEVLCGNGDAFKALDVIYELWSKGCVPSLISCIVMIDGLRELGKTDEAMRLVEKMLKEEGMVLDVVTFNYVLQDLCDAGRTEEANRLRLLASSKGLEPDGMTYKILVTGYRGEGNRTDGELVVNEMLDRGFIPDLASYNKLMDGLSNCQRLRRYQMNKIGS* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0781 382 Gene3D Tetratricopeptide repeat domain 312 378 IPR011990 GO:0005515
Psa3g0781 382 Gene3D Tetratricopeptide repeat domain 8 137 IPR011990 GO:0005515
Psa3g0781 382 Gene3D Tetratricopeptide repeat domain 138 211 IPR011990 GO:0005515
Psa3g0781 382 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 109 143 IPR002885 -
Psa3g0781 382 PANTHER FERTILITY RESTORER HOMOLOGUE A-LIKE 1 370 - -
Psa3g0781 382 TIGRFAM PPR: pentatricopeptide repeat domain 77 110 IPR002885 -
Psa3g0781 382 TIGRFAM PPR: pentatricopeptide repeat domain 323 355 IPR002885 -
Psa3g0781 382 TIGRFAM PPR: pentatricopeptide repeat domain 181 213 IPR002885 -
Psa3g0781 382 TIGRFAM PPR: pentatricopeptide repeat domain 252 286 IPR002885 -
Psa3g0781 382 TIGRFAM PPR: pentatricopeptide repeat domain 146 178 IPR002885 -
Psa3g0781 382 TIGRFAM PPR: pentatricopeptide repeat domain 111 145 IPR002885 -
Psa3g0781 382 Gene3D Tetratricopeptide repeat domain 212 311 IPR011990 GO:0005515
Psa3g0781 382 Pfam PPR repeat 175 203 IPR002885 -
Psa3g0781 382 Pfam PPR repeat family 108 156 IPR002885 -
Psa3g0781 382 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 179 213 IPR002885 -
Psa3g0781 382 Pfam Pentatricopeptide repeat domain 314 364 IPR002885 -
Psa3g0781 382 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Psa3g0781 382 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 285 319 IPR002885 -
Psa3g0781 382 PANTHER ATPASE EXPRESSION PROTEIN 3 1 370 - -
Psa3g0781 382 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 74 108 IPR002885 -
Psa3g0781 382 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 144 178 IPR002885 -
Psa3g0781 382 Pfam PPR repeat 78 105 IPR002885 -
Psa3g0781 382 Pfam PPR repeat 46 67 IPR002885 -
Psa3g0781 382 Pfam PPR repeat 254 279 IPR002885 -
Psa3g0781 382 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 320 354 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0781 80 366 Miscellaneous Gene Families AT4G11690 32.056 3.94e-45 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0781 - - aprc:113860936 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0781 3 69277856 69279004 Psa3g0781 3 69277856 69279004 ECH