Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0760 ATGGAAGCAGTACTAGCATCCCGCCATTTGTCGACACCGTTCTCTCACAATCGAACCACCGCCTCCTCCTCCTCCTCCTCCTCTTCTATCAAACCTTCCTCTTCCATTTCTTTTCGGAATTCCTTCGCGAGAGAGATATGGGGTTTGGTTCAGTCCAAGAGCTTAACTTCCAGAAGAACGGACATGATTCGTCCGGTTGTTGTCAGGGCTGAAATGTTCGGACAGTTAACATCTGGTCTTGAATCTGCCTGGAACAAGCTCAAACGAGAAGAGGTTTTGACTAAAGAGAATATTGTGGAGCCTATGCGAGATATTCGGAGAGCTCTTTTAGAAGCTGATGTTAGTCTTCCTGTTGTAAGAAGGTTTGTGCAATCTGTTACTGATAAAGCTGTGGGTGTTGGAGTCACTCGAGGAGTCAAACCCGATCAACAATTGGTTAAGATTGTTCATGATGAACTTGTACAATTGATGGGTGGAGAGGTCTCTGAACTAACTTTTGCCAATTCGGGGCCCACTGTCATTTTATTGGCTGGACTCCAGGGAGTTGGGAAGACAACTGTATGTGCAAAGTTAGCAACTTATTTCAAGAAACAGGGAAAGAGTTGTATGTTAGTTGCTGGGGATGTTTACAGACCTGCTGCTATTGACCAGCTGACTATTTTGGGCAAGCAGGTGGATGTGCCTGTCTATGCAGCAGGTACCGATGTTAAGCCTTCAGTGATTGCTAAACAAGGTTTTGAAGAGGCCAAAAAGAAGAAAATTGACGTGGTTATTGTTGACACTGCTGGTAGGCTGCAGATAGACAAAGCTATGATGGACGAGTTAAAAGAAGTGAAACAGGTACTGAATCCAACAGAAGTTTTGCTAGTTGTGGATGCTATGACAGGGCAAGAAGCAGCAGCTCTGGTGACTACTTTCAATCTTGAGATTGGAATAACTGGTGCCATCTTGACAAAGTTGGATGGTGATTCAAGAGGTGGAGCAGCTTTGAGTGTCAAAGAGGTATCTGGAAAACCAATTAAGCTGGTAGGACGGGGAGAACGCATGGAAGATCTTGAACCTTTTTACCCCGACCGAATGGCAGGACGTATACTAGGAATGGGAGATGTTCTTTCATTTGTGGAAAAGGCACAAGAAGTTATGCTTGAAGAAGATGCTGAAGACATGCAAAAGAAAATCATGAGTGCAAAGTTTGACTTTAATGATCTTCTAAAGCAAACTCGTACTGTTGCTAAAATGGGTTCTGTGTCTCGAGTCCTTGGGATGATTCCTGGTATGGCAAAGGTTACTCCTGCTCAAATTCGAGAAGCAGAGAAGAATTTGCAGTTTATGGAAGTGATAATAGAAGCAATGACCCCTGAGGAAAGGGGAAAGCCAGAACTGTTAGCAGAATCCCCTGTCAGGAGGAAAAGAGTTGCTCAGGAATCAGGGAAGACAGAGCAGCAGGTAAGCCAACTCGTAGCTCAACTATTTCAAATGCGTGTTCGGATGAAGAAGCTAATGGGTGTAATGGAAGGTGGATCAATGCCAACACTTAGTAATCTTGAGGAAGCACTTAAAGCAGACGAAAAGGCTCCACCTGGCACTGCTAGGAGGAGAAAGAAAGGAGGTTTAAGAAGGCTATTTAAAGGCCGATCTTCGAAGAGTTCGTTGCCAGCTCCTCGCGGATTTGGGAGCAAAAACTGA 1686 0.446 MEAVLASRHLSTPFSHNRTTASSSSSSSSIKPSSSISFRNSFAREIWGLVQSKSLTSRRTDMIRPVVVRAEMFGQLTSGLESAWNKLKREEVLTKENIVEPMRDIRRALLEADVSLPVVRRFVQSVTDKAVGVGVTRGVKPDQQLVKIVHDELVQLMGGEVSELTFANSGPTVILLAGLQGVGKTTVCAKLATYFKKQGKSCMLVAGDVYRPAAIDQLTILGKQVDVPVYAAGTDVKPSVIAKQGFEEAKKKKIDVVIVDTAGRLQIDKAMMDELKEVKQVLNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMLEEDAEDMQKKIMSAKFDFNDLLKQTRTVAKMGSVSRVLGMIPGMAKVTPAQIREAEKNLQFMEVIIEAMTPEERGKPELLAESPVRRKRVAQESGKTEQQVSQLVAQLFQMRVRMKKLMGVMEGGSMPTLSNLEEALKADEKAPPGTARRRKKGGLRRLFKGRSSKSSLPAPRGFGSKN* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0760 561 SMART SRP54_N_2 72 157 IPR013822 GO:0005525|GO:0006614
Psa3g0760 561 PANTHER SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54 48 551 IPR022941 GO:0003924|GO:0005525|GO:0006614|GO:0048500
Psa3g0760 561 Pfam SRP54-type protein, helical bundle domain 76 153 IPR013822 GO:0005525|GO:0006614
Psa3g0760 561 SMART SRP54_3 171 366 IPR000897 GO:0005525|GO:0006614
Psa3g0760 561 PANTHER BNAC02G02820D PROTEIN 48 551 - -
Psa3g0760 561 SUPERFAMILY Signal peptide-binding domain 397 498 IPR036891 GO:0006614|GO:0008312|GO:0048500
Psa3g0760 561 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 424 IPR027417 -
Psa3g0760 561 TIGRFAM ffh: signal recognition particle protein 74 499 IPR004780 GO:0003924|GO:0005525|GO:0006614|GO:0048500
Psa3g0760 561 MobiDBLite consensus disorder prediction 457 476 - -
Psa3g0760 561 Gene3D - 377 501 IPR036891 GO:0006614|GO:0008312|GO:0048500
Psa3g0760 561 SMART AAA_5 170 317 IPR003593 -
Psa3g0760 561 MobiDBLite consensus disorder prediction 514 561 - -
Psa3g0760 561 Hamap Signal recognition particle 54 kDa protein [srp54]. 76 542 IPR022941 GO:0003924|GO:0005525|GO:0006614|GO:0048500
Psa3g0760 561 Pfam Signal peptide binding domain 397 495 IPR004125 GO:0006614|GO:0008312|GO:0048500
Psa3g0760 561 MobiDBLite consensus disorder prediction 457 479 - -
Psa3g0760 561 CDD SRP_G 172 364 - -
Psa3g0760 561 Pfam SRP54-type protein, GTPase domain 171 366 IPR000897 GO:0005525|GO:0006614
Psa3g0760 561 ProSitePatterns SRP54-type proteins GTP-binding domain signature. 339 352 IPR000897 GO:0005525|GO:0006614
Psa3g0760 561 Gene3D - 161 355 IPR027417 -
Psa3g0760 561 Gene3D - 75 376 IPR042101 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0760 Psa-Chr3 67685862 67693403 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0760 K03106 - gmx:100782581 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0760 3 67685862 67693403 Psa3g0760 3 67685862 67693403 ECH