Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0759 ATGATGGAAGTGCTTCAATTCCCTTCACCTTCAAGCTGTTCATCAAGTCCATGTGTTCGTCTCAACTCCAATGATGCTTCACACCAAACTTCTCTTCTTAACAACGACGAAACTGAAACTGTTATTCACCGTTTTCAGATTCAACACCAGCAACAGCAACAACAGAATCAAGAGAAGGATAGAGAAAGAGATCAACTTTCTATTTTGACTCTTCTGATTGCTACTTTTAGAAAATCTTTGATTGGTTGTAGCACTACTGCTACTGATATTGCTTCTTCCATGGAAATTGGTTGGCCTTCCAATGTTAGACACGTTGCTCATGTTACTTTTGATCGCTTTCATGGTTTTCTTGGCTTGCCTGTTGAATTTGAACCTGAAGTTCCAAGAAGACCTCCCAGTGCTAGCACAAGTGTTTTTGGTGTTTCAACAGAATCTATGCAGCTTTCTTTCGATGCCAGAGGAAATAGTGTGCCTACAATTCTTCTCTTAATGCAAAGACATCTGTATGCACAAGGAGGCCTTCAGGCGGAAGGAATCTTCAGAATTAATGCTGAAAATAGTCAAGAGGAGTTTGTGAGGGAACAATTGAACAGAGGAGTGGTACCGAATGGCATTGATGTGCACTGCCTGGCAGGTCTTATAAAGGCTTGGTTCAGAGAACTTCCAACCGGTATATTGGACCCTCTTTCACCAGAGCAGGTGATGCAGTCCCAATCAGAAGAAGAATGTGCGCAGCTTGTTAGGCTTCTTCCTCCAACAGAAGCTGCCCTCCTAGATTGGGCAGTCAACCTAATGGCAGATGTTGCTCAACTGGAACATTTGAACAAGATGAATGCACGTAATGTTGCGATGGTTTTTGCACCAAACATGACTCATATGGTAGATCCTTTGACTGCTTTGATGTATGCTGTACAAGTCATGAATTTCCTCAAGACTCTAGTAGTGATGACACTAAAAGAAAGAGAGGAGTCAATCACAAAATTAAACCCTGTTTCGAATATAAACTCCTTTGATGACGACGGGCATCAAAATGATTCACAAGTGCTTTTCAAGGATGACAGTGAATACGGAAACAATTTTAGCGATGAAGACACAGTATTTGTCACAGCCGAACCTTCGCATCAAAGCCCTACACATCTATTCAAAGATGGTTGTGAAACTGAAAGCGGATCCAAAAGTCTACCAACATCTGCGGAAAGTTTTATTTCGAGCGGAAATCGGTTGCTTGTTGACAGTTGTCCTTGTGGCGTTGTCTCTCAAATTTGCTCTCTGGCAATGGGGGATCAAACAAAAATTTGTAAAAACAAAAGCCTTCAGTTGAATACTTCTGATACAGACAAGTGTTCAGCAGGAGCGGTGGAGAAGAACAGGGGAATTGCACTTATTGGACGTATAAATTCAAGATCTGAGTTGGCCGATTCTTGGCGTTGA 1431 0.4186 MMEVLQFPSPSSCSSSPCVRLNSNDASHQTSLLNNDETETVIHRFQIQHQQQQQQNQEKDRERDQLSILTLLIATFRKSLIGCSTTATDIASSMEIGWPSNVRHVAHVTFDRFHGFLGLPVEFEPEVPRRPPSASTSVFGVSTESMQLSFDARGNSVPTILLLMQRHLYAQGGLQAEGIFRINAENSQEEFVREQLNRGVVPNGIDVHCLAGLIKAWFRELPTGILDPLSPEQVMQSQSEEECAQLVRLLPPTEAALLDWAVNLMADVAQLEHLNKMNARNVAMVFAPNMTHMVDPLTALMYAVQVMNFLKTLVVMTLKEREESITKLNPVSNINSFDDDGHQNDSQVLFKDDSEYGNNFSDEDTVFVTAEPSHQSPTHLFKDGCETESGSKSLPTSAESFISSGNRLLVDSCPCGVVSQICSLAMGDQTKICKNKSLQLNTSDTDKCSAGAVEKNRGIALIGRINSRSELADSWR* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0759 476 Gene3D Rho GTPase activation protein 129 329 IPR008936 GO:0007165
Psa3g0759 476 PANTHER RHO GTPASE-ACTIVATING PROTEIN 1 1 476 - -
Psa3g0759 476 SMART RhoGAP_3 155 318 IPR000198 GO:0007165
Psa3g0759 476 CDD RhoGAP 158 313 - -
Psa3g0759 476 SUPERFAMILY GTPase activation domain, GAP 135 315 IPR008936 GO:0007165
Psa3g0759 476 CDD CRIB 94 134 - -
Psa3g0759 476 Gene3D CRIB domain 91 125 IPR036936 -
Psa3g0759 476 SMART PBD_5 96 130 IPR000095 -
Psa3g0759 476 Pfam P21-Rho-binding domain 95 122 IPR000095 -
Psa3g0759 476 Coils Coil 42 69 - -
Psa3g0759 476 Pfam RhoGAP domain 158 292 IPR000198 GO:0007165
Psa3g0759 476 ProSiteProfiles Rho GTPase-activating proteins domain profile. 141 326 IPR000198 GO:0007165
Psa3g0759 476 PANTHER MKIAA1688 PROTEIN 1 476 IPR044785 GO:0005096
Psa3g0759 476 ProSiteProfiles CRIB domain profile. 96 109 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0759 Psa-Chr3 67670403 67674726 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0759 - - gmx:100783118 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0759 3 67670403 67674726 Psa3g0759 3 67670403 67674726 ECH