Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0719 TATTCTCCCCCTTCTAGTGTCATGCACTCAACTTCAAAAGAGGATGCTCAGAAACTTATGGATGAAACTGCTGAAGCTAAAGCTTATCAAGATAAAATCATGGCAAGTTCAAGCCCTGCAGTTAACAGAAGATTGGAAGGAAAAGTGGCGTTGATAACGGGAGGAGCTAGTGGAATTGGCAAACGAACTGCAGAAATATTCGTCCAACACGGAGCCAAAGTAGTAATAGCAGACATCCAAGATGAACTTGGAGATTCAGTTGTTCAATCCATAGGACCATCAACATGTATGTACGTACATTGCGATGTCACCGACGAGAATCAAATAAAAAACGCAGTGGAAACAACCGTACAAACATACGGAAAACTCGACATCATGTTCAACAACGCCGGTATAGGTGGCCCGAACAACTCTCGAATCATCGACAACGATAAAGCAGATTTCGAACGCGTATTAAGCATCAATGTGACAGGTGTTTTCCTCGGCATCAAGCACGCAGCCCAAGCTATGATCCCATCTCGCGGAGGTAGCATTATAAGCACTTCTAGCATAAGCTCTTATGTTGGTGGTGCTGCCTCACATGCTTATTGTTGTGCAAAGCACGCCGTGGTTGGTTTAACTAAAAACGCAGCAGTTGAACTTGGACAATTCGGGATTAGAGTGAACTGTTTATCTCCTTATGCTTGTGCAACTCCTTTGGCAACACAGTTTGTTGGATGTAATGAAGGTGAGCTTGAAAGTGCCATGAACTCGCTTGCTAATCTTAAGGGAGTGACCTTTAAAACCGATGATGTGGCAAATGCAGCACTTTATTTTGCAAGTGATGATTCAAGGTATGTGAGTGGCCATAATTTGCTCATAGATGGAGGATTTAGCATTGTTAATCCATCCTTTCACATGTTTCAGTATTCAGAGTCTTGA 921 0.4278 YSPPSSVMHSTSKEDAQKLMDETAEAKAYQDKIMASSSPAVNRRLEGKVALITGGASGIGKRTAEIFVQHGAKVVIADIQDELGDSVVQSIGPSTCMYVHCDVTDENQIKNAVETTVQTYGKLDIMFNNAGIGGPNNSRIIDNDKADFERVLSINVTGVFLGIKHAAQAMIPSRGGSIISTSSISSYVGGAASHAYCCAKHAVVGLTKNAAVELGQFGIRVNCLSPYACATPLATQFVGCNEGELESAMNSLANLKGVTFKTDDVANAALYFASDDSRYVSGHNLLIDGGFSIVNPSFHMFQYSES* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0719 306 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 40 303 - -
Psa3g0719 306 PRINTS Glucose/ribitol dehydrogenase family signature 49 66 IPR002347 -
Psa3g0719 306 PRINTS Glucose/ribitol dehydrogenase family signature 121 132 IPR002347 -
Psa3g0719 306 PRINTS Glucose/ribitol dehydrogenase family signature 170 186 IPR002347 -
Psa3g0719 306 PRINTS Glucose/ribitol dehydrogenase family signature 196 215 IPR002347 -
Psa3g0719 306 PRINTS Glucose/ribitol dehydrogenase family signature 217 234 IPR002347 -
Psa3g0719 306 PRINTS Glucose/ribitol dehydrogenase family signature 255 275 IPR002347 -
Psa3g0719 306 Gene3D - 34 303 - -
Psa3g0719 306 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 46 294 IPR036291 -
Psa3g0719 306 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 121 132 IPR002347 -
Psa3g0719 306 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 176 184 IPR002347 -
Psa3g0719 306 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 196 215 IPR002347 -
Psa3g0719 306 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 183 211 IPR020904 GO:0016491
Psa3g0719 306 PANTHER SECOISOLARICIRESINOL DEHYDROGENASE-LIKE 40 303 - -
Psa3g0719 306 Pfam Enoyl-(Acyl carrier protein) reductase 54 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0719 Psa-Chr3 64216292 64219773 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0719 43 291 Miscellaneous Gene Families AT4G05530 33.466 1.05e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0719 - - gmx:100802915 460.685