Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0717 ATGGGTAACGCTCACTCTCCTCCCACTGATCCTCAATACGTTTCAGCATCCAGAGCTTTTACTCAAAAGGGACTTGAAGACCTAAAATCACTCTTCAATTCTTTAGCATCTCAATCACAGAGCAATGGTGAATACATTTCTCCTTCAATTTTTCAGTCATATTTCAAACTCCATGGCCCTATTGGAGAAAGGATGTTTGATTTAGTTACTCAGGAGCGGAAGGATCAAAAGTTAACTTTTGAAGACCTTGTAATTACTAAAGCTACTTATGAGAAAGGAACAAAAGATGAAATTGAAGAATTTATATTTCGGTTTTTAGATGTATCTGGGGATAATTTTGTAGGAAGGTCTGATTTGGAATCAGTTATGAATGCTATCTTTACCGATATATTATGCATAGAAGGTTCTGAAGTTGGATCAAGTTCGCATCAAGATATTGTCAACATATTTCTGAGTGCTGCCAATTTCTCCATACATGATGAAAAGTGCTCTGAGAAGGCTATGTCTTTTGAAGATTTCAGAAGTTGGAGTTCTCATCTGCCAACTGTGAGGAAGCTTCTTGGAAGCTTGCTTTTGCCTCCTGATTCAGGACGACCAGGTACTCAAATTCCTAATCTACTGACCCCGAAGGATATTGATTCTAACACTGTACTTTTGAGAAAGGAGTATGCTTGGCATATAGGAGGAGCACTTTCTCAGCACGAGCTGGAAGATTGGAAGCTTTTGTATCACAGTTCTGTTAATGGTCTTAGTTTCAATACATTCTTGGGAAACATTTCAAACCACAAAGGCCCAACTGTGCTAATTATTAAGGATAAAGATGGTTATATATATGGAGGATATGCTTCTCAACAATGGGAGCGGCATGCTGAATTTTATGGAGACATGAAATGTTACCTTTTTCAACTAAATCCAAAGGCATCTATATTTAGGCCGACTGGAGCAAACACTAATCTACAATGGTGTGCTGTCAACTTCAGTTCAGAGGACATTCCAAATGGCATTGGTTTTGGAGGAAAAGTAAATCACTTAGGGTTATTTATCTCAGCAAACTTTGATCAAGGACATACATTTTCATCTTCAACATTTGGTAACCCTAGCCTCTCCAAAACTAACCGAATAATACCTGAAACAATAGAATGCTGGGGAGTGACTCAAGGTGTACAAAACAAGACTGATGGTGCTAAGGGAAGTGTACTTGAGAGGTTTAAGGAAGATCGGCATATGCTCAATATGGTAGGGCTAGCGAATTCGAGCGAGTAA 1263 0.3872 MGNAHSPPTDPQYVSASRAFTQKGLEDLKSLFNSLASQSQSNGEYISPSIFQSYFKLHGPIGERMFDLVTQERKDQKLTFEDLVITKATYEKGTKDEIEEFIFRFLDVSGDNFVGRSDLESVMNAIFTDILCIEGSEVGSSSHQDIVNIFLSAANFSIHDEKCSEKAMSFEDFRSWSSHLPTVRKLLGSLLLPPDSGRPGTQIPNLLTPKDIDSNTVLLRKEYAWHIGGALSQHELEDWKLLYHSSVNGLSFNTFLGNISNHKGPTVLIIKDKDGYIYGGYASQQWERHAEFYGDMKCYLFQLNPKASIFRPTGANTNLQWCAVNFSSEDIPNGIGFGGKVNHLGLFISANFDQGHTFSSSTFGNPSLSKTNRIIPETIECWGVTQGVQNKTDGAKGSVLERFKEDRHMLNMVGLANSSE* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0717 420 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 412 - -
Psa3g0717 420 SUPERFAMILY EF-hand 3 190 IPR011992 -
Psa3g0717 420 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 1 412 - -
Psa3g0717 420 SMART 109ultra 216 385 IPR006571 -
Psa3g0717 420 Gene3D - 2 189 - -
Psa3g0717 420 ProSiteProfiles TLDc domain profile. 217 385 IPR006571 -
Psa3g0717 420 ProSiteProfiles EF-hand calcium-binding domain profile. 94 129 IPR002048 GO:0005509
Psa3g0717 420 ProSitePatterns EF-hand calcium-binding domain. 107 119 IPR018247 -
Psa3g0717 420 Pfam TLD 241 384 IPR006571 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0717 102 419 EF-hand Containing Proteins AT5G06260 61.180 6.12e-145 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0717 - - gmx:100804508 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0717 3 64173330 64181921 Psa3g0717 3 64173330 64181921 ECH