Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0714 ATGTGTCACCGGAAAGTCCTCGCTTCCCTCGCTGTATCATCGGTTCCTCTTTCTCCACGACAAAGTCGTGCTGTTATTACGAGATCAGTATGGAGTTCCAATCTTGATCAAGAATTCAGATTGCTTCGATCCGTGATTGATCTTTATCCTCTCATTTCTATGGACACTGAATTTCCCGGTGTTGTTATCGGTTCTGATCCCGGCGATCCATTTCGGGACGGTGCTGACACTCTCTACTCTGTTCTGAAAGCCAATGTGGACCGGTTGCATCTGATACAGATTGGGCTTACTCTATCTGATCATACAGGTGATCTTCCAAATTTAGGCACTGATCAATTATTTATTTGGGAGTTTAATTTCAAAGACTTTGACGTTGTTCGAGATGATTTTGCATTGGACTCTATTGAGTTGTTGAGGCATCAAGGGATTAATTTTGAGAAGAATAGAAAGTTTGGAATTGACTCGTTTAGGTTCGCTGAGTTGATGATGTCTTCGGGTCTTGTATGCGATCCGAATGTTAATTGGGTGACATTTCATAGTGCATATGATTTCGGATATCTTGTAAAGTTGCTGACACATCGGGACTTGCCTGAGGATTTAGACGAGTTCCTCCGTGTTGTGATGGTGTTTTTTGGAGATAAGGTGTTTGATGTTAAGCATTTGTTGAAATTCTGCTCCAACTTGCATGGTGGGTTGGAGGGGATTTGCCGGTCAATGAAGGTGGATCGGCTTATAGGGAAAAGTCATCAGGCGGGCTCTGATAGTTTGCTTACGTTACACGCTTTTCAGAATATCATAGAGCTTTACTTTGAAAAGGCGGAGGGGTTTGTCAAATACGGCGGTGTATTGTATGGATTAGAAGTTCGTTACAACAACAACAAAGCCTTATCCCAAACGGTGTATTGTATGAATTAG 915 0.423 MCHRKVLASLAVSSVPLSPRQSRAVITRSVWSSNLDQEFRLLRSVIDLYPLISMDTEFPGVVIGSDPGDPFRDGADTLYSVLKANVDRLHLIQIGLTLSDHTGDLPNLGTDQLFIWEFNFKDFDVVRDDFALDSIELLRHQGINFEKNRKFGIDSFRFAELMMSSGLVCDPNVNWVTFHSAYDFGYLVKLLTHRDLPEDLDEFLRVVMVFFGDKVFDVKHLLKFCSNLHGGLEGICRSMKVDRLIGKSHQAGSDSLLTLHAFQNIIELYFEKAEGFVKYGGVLYGLEVRYNNNKALSQTVYCMN* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0714 304 Pfam CAF1 family ribonuclease 30 153 IPR006941 -
Psa3g0714 304 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 19 288 IPR039637 GO:0004535|GO:0030014
Psa3g0714 304 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED 19 288 - -
Psa3g0714 304 Gene3D - 13 289 IPR036397 GO:0003676
Psa3g0714 304 SUPERFAMILY Ribonuclease H-like 23 288 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0714 Psa-Chr3 63343229 63344890 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0714 K12581 - gmx:100790027 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0714 3 63343229 63344890 Psa3g0714 3 63343229 63344890 ECH