Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0706 ATGGCTTGCTCAGCTCCATCTGCTTCTCTCCTATCTTCAAACCCTAACACACTCTTCTCTCCCAAATTCTCTTCTCCGCGCCTCTCTTCTCTCTCAATCCCCAATGCACCCAATTCTCTCCCCAAACTACGCACTTCCCTCCCTCTTTCCCTCAACCGCTCCTCTTCCTCTCGCCACACTTTCGTCGTTAGGGCTTCTGGTGAATTACCATTAGTTGGGAACTCAGCGCCGGATTTTGAAGCTGAAGCTGTTTTCGATCAGGAGTTTATCAAGGTCAAACTATCTGAATATATTGGGAAGAAATATGTTATCCTCTTTTTCTACCCATTGGATTTCACATTTGTTTGTCCCACTGAAATCACTGCTTTCAGTGACCGCCATGCGGAATTTGCAGAACTTAATACCGAGATATTGGGTGTTTCAGTTGACAGTGTGTTCTCGCATCTTGCATGGGTTCAAACAGATAGAAAGTCTGGTGGTCTTGGCGACTTGAACTATCCTTTGGTTTCCGATGTCACCAAATCCATATCAAAATCTTATGGTGTTCTCATTCCTGATCAGGGGATAGCATTGAGAGGATTGTTCATTATTGACAAGGAAGGGGTTATCCAACATTCTACCATCAACAACCTCGGAATTGGTAGAAGTGTTGACGAGACAAAGAGAACACTCCAGGCTTTGCAGTATGTGCAGGAGAACCCAGATGAAGTTTGCCCTGCTGGGTGGAAGCCTGGTGAGAAGTCCATGAAACCAGACCCCAAAGGTAGCAAAGAGTACTTTGCTGCTGTTTCACCGAAACCATCCTCAGCCACTCCATGCTACACCACCAGTTACCCTACGCAAAAGACTTCATTAAGAACAACCCAAATCCAAAGACTCAACCCTCCATTTCTCAGAAGTGATAAACAGCGATGGAAGGTGAAGCCTTTATCAGCATCTCTTTCGTTTCCACAGCCACTTGACCTCACAGAAGACAACGTGAGACAGGCTTTGGTCGATGCTCGAGCTGAACTTGCTGCGATCTTTGACACCTCTGTTGGCATGACAGGTGTAGTTGAATTGGTGGAATTAGATGGACCTTACGTAACGATTAGTCTCAAGGGTAGGTTTTGGCACAAGCGTTCAACTGTCCTAGCCAGACTCGCCAATTATCTCAAACAGAGGATTCCTGAGATTTTAGAGGTTGAAATAGAAAATGAGAAACAATTGGATGATAGTCCTGCCAATTTCTAA 1233 0.4517 MACSAPSASLLSSNPNTLFSPKFSSPRLSSLSIPNAPNSLPKLRTSLPLSLNRSSSSRHTFVVRASGELPLVGNSAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRHAEFAELNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDVTKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKGSKEYFAAVSPKPSSATPCYTTSYPTQKTSLRTTQIQRLNPPFLRSDKQRWKVKPLSASLSFPQPLDLTEDNVRQALVDARAELAAIFDTSVGMTGVVELVELDGPYVTISLKGRFWHKRSTVLARLANYLKQRIPEILEVEIENEKQLDDSPANF* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0706 410 PANTHER 1-CYS PEROXIREDOXIN PER1 38 263 - -
Psa3g0706 410 Gene3D Glutaredoxin 64 264 - -
Psa3g0706 410 SUPERFAMILY Thioredoxin-like 70 266 IPR036249 -
Psa3g0706 410 Pfam C-terminal domain of 1-Cys peroxiredoxin 226 260 IPR019479 GO:0051920
Psa3g0706 410 PANTHER THIOREDOXIN PEROXIDASE 38 263 - -
Psa3g0706 410 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 350 397 IPR034904 -
Psa3g0706 410 Pfam AhpC/TSA family 72 205 IPR000866 GO:0016209|GO:0016491
Psa3g0706 410 CDD PRX_Typ2cys 72 245 - -
Psa3g0706 410 Gene3D - 319 398 IPR034904 -
Psa3g0706 410 ProSiteProfiles Thioredoxin domain profile. 70 229 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0706 Psa-Chr3 62997042 63001621 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0706 K03386 - gmx:100786990 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0706 3 62997042 63001621 Psa3g0706 3 62997042 63001621 ECH