Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0703 ATGCTAACCAAAACTAATACTAATGCATTTATAAACAAGCCACCGAAACAGAAATATCCCACAACTCATTTCATTCTATCTTTCACTTTTCCACAAAACACAAACAAGATTACAACACCATTTCCAATGGCTTATCCTTACATTCTCTTTTCCCTCTCTCTTCTCTCTCTCCTCACATTCTCTTCCTCAAACACCATTACTCTTCCACTTTCCCCACTATTCACCAAATCCCAATCCTCAGATCTAATCAACTCCCTCAAAACCGCCGCTACATCTTCCCTAACAAGAGCCCACCACCTCAAAACCCAAAACCCGAATCACAAGCAACCATCATCTTCCCATACCAACACACAAATTTACCCCAAAAGCTACGGCGGTTATTCAATCAACCTCAACTTCGGAACACCGCCGCAAACCTTGTCTTTCATCTTAGACACAGGTAGCAGCCTCGTATGGTTCCCGTGTTCCTCTCACTACCTCTGTTCCAATTGCAACTTCCCAAACATCAACCCGACAAAAATCCCTTCCTTCATTCCCAGAAACTCATCCACCTCGAAAATCCTCGGTTGCACAAACTCCAAATGCGGTTACATTTTCGGACCAGACATTAAATCTCGTTGCAGAGGTTGTAATCCACAATCTCAAAACTGTAGCAACATCACTTGTCCTGCTTATATAATCCAATACGGTTTAGGCTCAACAGCTGGTTTCTTACTATTGGATAATCTAGATTTCCCCGGGAAAAAAACAGTAGAAAATTTTCTCGTAGGTTGTTCCATTTTATCTACCCGACAACCCTCCGGTATCGCCGGATTCGGTCGAGGAGAAGATTCTCTTCCGTCGCAAATGGGACTCAAAAGATTCTCTTATTGCTTACTTTCTCACCAATTCGACGACTCGTCGGAAAATAGTAATCTCGTTTTGCAGGTTTCTTCCACCGGCGATGGAAAAACAAGTGGCTTAAGCTACACGCCGTTTCGGAAAAACCCGTCAACGAACAACACGGCATTCCTTGAATACTATTATGTGAATCTTCGGACTGTCGTTATTGGAGGGAAACGTGTTAAGATTCCGTTAACGATTTCGGAACCGGGAACCGACGGTAACGGTGGAACCATCGTTGATTCTGGATCAACGTTTACTTATATGGAAAAGGAAATTTTTGATTTGGTTTCGAAAGAGTTTGAGAAGCAACTTTCTAATTATAGCAGAGCGAAAGACGTTGAAGCTGCATCGGGGTTGAGTTTATGTTTTAACTTCACCGACGTGAAAACAGTGCGGTTTCCGGAGTTGGTGTTTCAGTTTAAAGGAGGTGCGAAAATGAAGTTGCCGGTTGAGAATTATTTTTCTTTGGCGGGTGAAGGGGAGGCTGCGTGTTTGACTGTTATGTCTGACGGAGTTTCTGCGCCTGAGAGAAACGGTGGCCCGGCGATTATTTTGGGGAATTATCAGCAGCAGAATTTTAATATTGAGTTTGATTTGGATAATGATAGGTTCGGATTTGGACCTCAGAGTTGTCAAAAAAGTGCTTAA 1533 0.4286 MLTKTNTNAFINKPPKQKYPTTHFILSFTFPQNTNKITTPFPMAYPYILFSLSLLSLLTFSSSNTITLPLSPLFTKSQSSDLINSLKTAATSSLTRAHHLKTQNPNHKQPSSSHTNTQIYPKSYGGYSINLNFGTPPQTLSFILDTGSSLVWFPCSSHYLCSNCNFPNINPTKIPSFIPRNSSTSKILGCTNSKCGYIFGPDIKSRCRGCNPQSQNCSNITCPAYIIQYGLGSTAGFLLLDNLDFPGKKTVENFLVGCSILSTRQPSGIAGFGRGEDSLPSQMGLKRFSYCLLSHQFDDSSENSNLVLQVSSTGDGKTSGLSYTPFRKNPSTNNTAFLEYYYVNLRTVVIGGKRVKIPLTISEPGTDGNGGTIVDSGSTFTYMEKEIFDLVSKEFEKQLSNYSRAKDVEAASGLSLCFNFTDVKTVRFPELVFQFKGGAKMKLPVENYFSLAGEGEAACLTVMSDGVSAPERNGGPAIILGNYQQQNFNIEFDLDNDRFGFGPQSCQKSA* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0703 510 Gene3D Acid Proteases 100 307 IPR021109 -
Psa3g0703 510 PANTHER OS07G0603500 PROTEIN-RELATED 48 506 - -
Psa3g0703 510 PANTHER BNACNNG47670D PROTEIN 48 506 - -
Psa3g0703 510 Pfam Xylanase inhibitor N-terminal 127 307 IPR032861 -
Psa3g0703 510 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 142 153 IPR001969 GO:0004190|GO:0006508
Psa3g0703 510 SUPERFAMILY Acid proteases 122 506 IPR021109 -
Psa3g0703 510 Gene3D Acid Proteases 308 510 IPR021109 -
Psa3g0703 510 ProSiteProfiles Peptidase family A1 domain profile. 127 502 IPR033121 -
Psa3g0703 510 Pfam Xylanase inhibitor C-terminal 341 502 IPR032799 -
Psa3g0703 510 PRINTS Pepsin (A1) aspartic protease family signature 133 153 IPR001461 GO:0004190|GO:0006508
Psa3g0703 510 PRINTS Pepsin (A1) aspartic protease family signature 372 383 IPR001461 GO:0004190|GO:0006508
Psa3g0703 510 CDD pepsin_A_like_plant 126 506 IPR034161 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0703 Psa-Chr3 62499306 62501688 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0703 119 508 Miscellaneous Gene Families AT1G44130 24.700 4.86e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0703 - - gmx:100805927 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0703 3 62499306 62501688 Psa3g0703 3 62499306 62501688 ECH