Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0657 ATGGATTCTGAGAATGAGGTTGCTCTGGAGGAAGAGAAACGTGTAATTGGTGTGACTGATAAGAAGGACACAAACAAAGAAGATGCAAACGTTAATGGCGCAGAAATCCAAAATGTGAATGAAGAATCTAAGGTTGAAAGCCATATTTCTAATAATGACACGGTCGAATCTGAATCCTCAAAACATGCTAAGGAAACAAAGAGTAGAGAAAGTGTTGCTTCCAAGAATAACAAAGTTGCCAAAGATAAATCCAATTTGAAGGGACCAACTTCAACATCTAGAAAACAAAGGCCAACACTTTCTCAGAGTTTTTCCTTCCCAACCAAATCAACTCGTGAAGATTCTATGCAGAAAAGCATTGATGATTCTCTTGTTAAGACCAAAGTTAAAAATGTTAAAGCCAAAACAAACTCTGAAGGGAAATCAAATGAGAAAAAAACAAACACCGAAGGTTGTAATAAGAGGACTACTTTGTCATCCATACATGGTTTGAAACATTCTGTGTTTGGAAGGTCTAATTCACTTGGTGCAGTCACCAAGAGTCACACATCTGAGGCGTCCCTAAATGCTACTAATCCTCAGAGAAACATATGTTCTGGATTTTCATCTAGATTGGAAGTAAGAGCTGAAAAGAGAAAGGAGTTTTTCTCCAAGTTGGAAGAAAAAGTCCAAGCCAAGGAAGCAGAAAAATCCAATCAACAAGTCAAATCAAAGGAAAACCAAGAGGCAGAGATCAAGCAATTGAGAAAGAGTTTGAGTTTCAAAGCCACTCCAATGCCAAGTTTCTATAAGGAACCACCTCCAAAACTTGAGCTAAAGAAGATACCAACAACCCGGCCAAGATCTCCAAAGCTTGGAAGGAACAAAGAGTCTTCTTGTTCAAGTCCACGTGGGAATCAACAGCAGAGGGGTTCAGCCAAGGCAAAGATCATAAAGGGTCATAAAGATGTGATTTCGAAGAAACCAGTCATGAAAAATCAAGATAAAGTGAAGTGTGAAGGAAATGAAACCGAAGGAAGCAATGAAGAATGCAGAAATGACATGGAGCAACAGTCAGAGAGAGATCATTCTGCAAAGGATCATGCAGTGTCTTTGAATTCTACTACACCTGAGATTGTATCGTATGAGGGTACTGTTGAAGTGTAG 1146 0.3901 MDSENEVALEEEKRVIGVTDKKDTNKEDANVNGAEIQNVNEESKVESHISNNDTVESESSKHAKETKSRESVASKNNKVAKDKSNLKGPTSTSRKQRPTLSQSFSFPTKSTREDSMQKSIDDSLVKTKVKNVKAKTNSEGKSNEKKTNTEGCNKRTTLSSIHGLKHSVFGRSNSLGAVTKSHTSEASLNATNPQRNICSGFSSRLEVRAEKRKEFFSKLEEKVQAKEAEKSNQQVKSKENQEAEIKQLRKSLSFKATPMPSFYKEPPPKLELKKIPTTRPRSPKLGRNKESSCSSPRGNQQQRGSAKAKIIKGHKDVISKKPVMKNQDKVKCEGNETEGSNEECRNDMEQQSERDHSAKDHAVSLNSTTPEIVSYEGTVEV* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0657 381 MobiDBLite consensus disorder prediction 30 45 - -
Psa3g0657 381 MobiDBLite consensus disorder prediction 1 158 - -
Psa3g0657 381 Pfam Targeting protein for Xklp2 (TPX2) domain 204 269 IPR027329 -
Psa3g0657 381 MobiDBLite consensus disorder prediction 83 113 - -
Psa3g0657 381 MobiDBLite consensus disorder prediction 114 151 - -
Psa3g0657 381 MobiDBLite consensus disorder prediction 287 306 - -
Psa3g0657 381 MobiDBLite consensus disorder prediction 222 381 - -
Psa3g0657 381 PANTHER PROTEIN WVD2-LIKE 4 1 189 IPR044833 GO:0008017
Psa3g0657 381 PANTHER PROTEIN WVD2-LIKE 4 192 332 IPR044833 GO:0008017
Psa3g0657 381 MobiDBLite consensus disorder prediction 309 361 - -
Psa3g0657 381 MobiDBLite consensus disorder prediction 267 286 - -
Psa3g0657 381 Coils Coil 216 251 - -
Psa3g0657 381 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) FAMILY PROTEIN 1 189 - -
Psa3g0657 381 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) FAMILY PROTEIN 192 332 - -
Psa3g0657 381 MobiDBLite consensus disorder prediction 7 29 - -
Psa3g0657 381 MobiDBLite consensus disorder prediction 222 249 - -
Psa3g0657 381 MobiDBLite consensus disorder prediction 46 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0657 Psa-Chr3 58685354 58687731 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0657 - - mtr:MTR_7g106750 455.677