Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0610 ATGCTGAACGTGCTACGTGTGCACCTTCCTTCTGATATTCCCATTGTAGGCTGTGAGCTCACGCCTTATGTGCTCCTACGTCGGCCTGACAAAACCGTTACGACTGACGATGTACTTGAAACCGCACCCTTAGATGGGCATTTTTTGCGATATAAGTGGTATCGTGTACAGAATGATAAAAAGGTTGCTGTTTGTAGTGTACATCCATCCGAGCAGGCCACACTGCAGTGCCTAGGTTGTCTTAAGGGTAAAATTCCTGTTTCCAAAAGTTACCATTGCTCTCCCAAGTGTTTCTCAGATGCATGGCAGCACCACCGAGCGTTACATGACCGAGCTGCAAGTGCAGTTAATGAAAATGGAAATGAGGAGGAGGAGGTATTTGGGAGATTTAACAATTCTGGATCTGGGTCAATCAATACCGGCTTATCCTCCTCTGCATCTAGTGCTAACCTGTCAAATGGGTCTGCAACCGTGTATCCCGCAACTGTTACACAACGAAATGGTGGTGAAACTTGGTTTGAAGTTGGACGATCAAAGACATATACCCCATCAGCTGATGACATTGGTCATGTTCTTAAATTTGAATGTGTTGTAGTTGACGCAGAGACAAAACTTACTGTGGGGCACACAAACACTATTCTAACTTCCCGGGTCATTCCTGCTCCTTCACCTATCCCGCGCCAGCTGATACCTGTTGACGGGATGGGGAGTTTGGATATGGATGGGCGTATAACATCATCGGGAACTTTTACTGTTTTATCATACAACATATTGTCTGATTCATATGCCTCAAATGATCTATACAATTACTGCCCTTCGTGGGCTCTTTCCTGGCCGTATCGCAGACAAAATTTATTACGAGAAATAGTTGGTTACCGTGCCGATATTATTTGTCTACAAGAGGTCCAAAGCGATCATTATGATGAATTTTTTGCTCCTGAACTGGACAAACATGGCTATTACGGTCTTTACAAGAAAAAAACAAATGAGGTATATAATGGCAACATAAATACTATTGATGGTTGCGCAACATTTTTCCGTAGAGACAGATTCTCACATGTGAAGAAATACGAGGTTGAGTTTAATAAGGCCGCACAATCTTTAACAGATGCCATGATTCCAACCACTCAAAAGAAAACTGCATTGAACCGGCTTGTTAAGGATAATGTTGCACTAATAGTTGTTTTAGAAGCAAAAGTTAACAATCAGCCGGTTGATAATCCAGGGAAAAGACAGCTTCTGTGTGTGGCAAATACACATGTAAATGTCCACCAAGAACTAAAGGATGTTAAGCTCTGGCAGGTGCACACACTTTTAAAAGGATTGGAGAAAATTGCTATAAGTGCAGACATTCCAATGCTGGTTTGTGGTGACTTCAATTCAGTTCCAGGAAGTGCTCCTCATGCACTTCTTGCGATGGGGAAGGTAGACCCATCCCACCCAGATTTAGCAGTTGACCCACTCAACATATTGCGTCCTCACAGCAAATTGGTTCACCAGTTGCCACTGGTTAGTGCTTACTCTTCTTTTGCAAGAACGGTTGGCCTGGGATATGAACAGCATAAGCGAAGATTGGACAGCTCAACAAATGAACCTTTATTTACAAAGGTCACTAGAGATTTTATTGGCTCTCTTGATTATATATTTTACACAGCGGATTCATTAGTTGTGGAGTCATTATTAGAGCTATTGGATGAAGAGAGTTTGAGGAAAGACACAGCACTACCTTCTCCTGAATGGTCCTCAGATCATACAGCTCTCTTAGCTGAGTTTCGTTGCTGCAAAAGTATATCTAGGCGATGA 1803 0.4265 MLNVLRVHLPSDIPIVGCELTPYVLLRRPDKTVTTDDVLETAPLDGHFLRYKWYRVQNDKKVAVCSVHPSEQATLQCLGCLKGKIPVSKSYHCSPKCFSDAWQHHRALHDRAASAVNENGNEEEEVFGRFNNSGSGSINTGLSSSASSANLSNGSATVYPATVTQRNGGETWFEVGRSKTYTPSADDIGHVLKFECVVVDAETKLTVGHTNTILTSRVIPAPSPIPRQLIPVDGMGSLDMDGRITSSGTFTVLSYNILSDSYASNDLYNYCPSWALSWPYRRQNLLREIVGYRADIICLQEVQSDHYDEFFAPELDKHGYYGLYKKKTNEVYNGNINTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAMIPTTQKKTALNRLVKDNVALIVVLEAKVNNQPVDNPGKRQLLCVANTHVNVHQELKDVKLWQVHTLLKGLEKIAISADIPMLVCGDFNSVPGSAPHALLAMGKVDPSHPDLAVDPLNILRPHSKLVHQLPLVSAYSSFARTVGLGYEQHKRRLDSSTNEPLFTKVTRDFIGSLDYIFYTADSLVVESLLELLDEESLRKDTALPSPEWSSDHTALLAEFRCCKSISRR* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0610 600 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 34 595 - -
Psa3g0610 600 Pfam Endonuclease/Exonuclease/phosphatase family 253 584 IPR005135 GO:0003824
Psa3g0610 600 Gene3D Endonuclease/exonuclease/phosphatase 221 598 IPR036691 -
Psa3g0610 600 SUPERFAMILY DNase I-like 246 594 IPR036691 -
Psa3g0610 600 CDD Deadenylase_CCR4 252 593 - -
Psa3g0610 600 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 1-LIKE 34 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0610 Psa-Chr3 54812026 54819239 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0610 K12603 - gmx:100808935 1075.46