Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0601 ATGGAAGATCAACCTCCACCTTCCGAAGCATCAACTCGTCGTCCCAAGAGGGGCAGGCCTCCGAAGCAAACTTACAGGGAAATCGATCTAGATGAAGATGTGGAGGAGCGAGAGAGTTCGCATGAAGATTTCAGCGAACCACGCCGGATTCCGAAACCTAAGCGACCTCGGAATAATGAAGCAGCTCCGAGTCCTTCACTTAAACCTACTGATCAGACTTTGATTGAGACGATCAAAGGTAATGGCAAACTTATTCCTCATGTGGTCAAACTTTGGGTTGAAAGCTACGAAAAGGATCCCAGATCCGCATTGGTTGAACTCTTGATAATGCTGTTTGAGGCATGTGGAGTCAAGTATCACGCCAAAAGTGACCTCATGCATGAGATCGCTGTTGATGATGTTGTTGTTGATCTTGTCAATTCTGCTAAAAGGGGTGAAGTTGAAGATTATCTAAATTCTAAAAAGAAGGAGGTTAAAAACTTCAAAGAGAATCTAGAATCATTCTGGGATAATTTGGTCCGGGAATGTCAACATGGACCATTGTTTGACCAGGTTTTATTTGACAAGTGCATGGACTACATCATTGCACTTTCATGCACCCCTCCAAGAGTTTATCGTCAAGTTGCTTCATTGATGGGTCTTTCATTGGTTACATCATATATAACTATTGCTAATATGCTTGGAGTACAAAGAGAGACTACTCGAAGACAACTGGATGCTGAAAAGAAGAAATTAACTGAGGGGCCTAGGATGGAGTCACTAAATAAAAGGTTTTCTGAAATGCATGAGAAAATAACACTGTTGGAGGAGATGATGCGCAAGATATTTACTGGGTTATTTGTGCATCGCTACCGAGACATTGACCCCAATATTAGAATGTCATGCATTGAATCACTCGGTGCGTGGATCCTGTCATACCCGTCACTTTTTTTGCAGGATTTGTACTTGAAATATCTTGGGTGGACGCTAAATGACAAAATTGCTGGTGTAAGAAAGGCTTCAATACGAGCACTGCAAAATCTTTATGATATGGATGATAATGTACAGACCCTTGGTTTGTTTACTGAGAGATTTTCTGGCCGGATGATTGAGCTTGCTGATGACATTGATGTTGCTGTGGCTGTTCAGGCCATTGGCCTTGTCAAACAACTGTTTAGACACCAGCTTATTCCTGAAGATGATTTGGGTCCTTTGTATGACTTGCTGATTGACGATCCTCCAGAAATCAGGCACGCCATTGGAGCATTAGTATATGATCACTTAATTGCTCAAAAATTTAATAGCTCCCAATCAAGATCAATAGGTGAAAATGACAATTCTTCTGAGATTCATCTTAACAGAATGTTGCGAATTCTGGATGAGTTCCCACCCGATCCAATTTTGACAATTTATGTTATTGATGACGTGTGGGATTACATGAAAGCTATGAAGGATTGGAAGTGCATCATATCCATGCTCCTTGATGAAAATTCATCAATCTCTGACAAGAGTGCAACAAACTTGGTCCGACTCCTGTGTGCATCAGTGAAAAAGGCGGTTGGAGAGAGAATAGTTCCCACCATTGATAACAGAAAACAGTACCACAGCAAAGCCCAGAAAGAAATATTTGAAAATAATAAACAAGATATAACTGTTGCCATGATGAATAGTTACCCATCACTCTTGCGTAAATTTATTTCGGATAAAGCTAAAGTGTCATTGCTGGTCGAGATTGTTTTGTATATGAACCTTGAGTTTTATTCCTTGAAGAGGCAGGAACAGAATTTTAAAATTGTCCTCCAGCTTATGAAAGAGGCATTTTTTAAGCATGGTGACATGGACCCTCTGAGAGCTTGTGTGAAGGCAATTAATTTCTGTTGCATCGAAAGTCGAGGGGAATTGCAAGATTTTGCTCGAAATAAGTTAAAGGAACTTGAGGATGAAATTATTTCTAAGTTGAAATCTGCAATTAAAGAAGTAGTGGATGGGGGTGATGAATATTCTCTTCTTGTAAATTTGAGAAGGCTGTATGAACTCCAACTGTCTAGATATGTGCCTATTGATACCATATATGAAGACATTGTAATGGTGCTACGTGACTTTAGGAATATGGAGGATGAGGTTGTTGGTTTCCTGCTCCAGAACATGTATTTTCATCTGCTTTGGTGTTTGCAGTCCATAATAGATGGAAAAAGTGTTTCTGCTGCATCCGTAACTTCTCTCCTGTCTAAGCGTGATACTTTGTTACAAGAACTTGTATACTTTGTTGTTAACCTGGCAACTGACAGCAATGGAGGTAAAAGTGGAAGTGAACTTGCCCGCAGAGTGTGCACTTTGCTTGCAGAAACATGGTGCATACATAGGCCAACAATATTTTGTAAGACAAAGCTGGAAAGGTTGGGATATCAACCTAATGCATATGAGGTCCAGAAGTTCTGGGAACTTTGTCAACTGCAGTTTAATGATTCAGATGAGGTAGAAGAAGACGATGTAAACAAAGATGTAGTCAAAGATTATTCAGAAGAGATAAATAGATACTCTGTTATAATTGCTGCTTGCAAACTGATTACTAGTAATGTTGTCCCAAAGGATTATCTTGCTCCTGAGATTATTTCTCATTTTGTAATGCATGGAACACGTGTGGCAGAGATTGTAAAATATCTGATCACGTTTTTGAAAACATCAGAGGATGATTTGGCTGCCATTTTTCTTGAAGCACTTAAAAAGGCATATCTCCGGCCTACTATCGATAATGCTGAAAATGACAATATTTCATTGGTAAACTCTTTCTCGGGATGTAAAAAATTGGCCGCTCAGCTTTCTGGAACTTTTATCGGTGCTGCCCGGAATAAGCACAGGTCAGACATTTTAAAACTTGTCAAGGATGGTATTGAGTATGCTTTTGTAGATGCTCCAAGATATTTGTCTTTTCTGGAAGCGGCAGTGATCCATTTTGTGCCAAAACTCCCTGCATCGGATTTGTTGGAAATTATGAAGGATGTTGAAAGGCGAACTGAAAATGTAAATAAAGACGAAAATCCCAGTGGCTGGCGTCCCTATTGCATATTTGTTGAGGCCTTGCGGGAAAGATGTGCAAAGAACGAAGTCTTTCAAGATGAAAAAGAAGGGGTTACTGTTAAGCGCCGGGGTCGTCCACGGAAATTGCCAATCATGGCAGGAAAGAAGCTTTTTAATGAGCATAGCTCAAGTGAAGATGAGGATTCCATTAGTGCATCCGAACAAGATGCTCAAGATGAAAGGGGGAGGCAAGAGGAGGAAGTTGAAGGCACTCCTATGATACATTCAGCCAGGCTCTCATCAAAGATAAGGTCGCTGCGAGTTTCTAGGGAGGAAAGCAAAGGTCAGACAGATACAGGGAATTCTGGGAGAGCTGTAGACAATATATCTGCTTCTAGAGCATCAGGTATCACATATTAG 3417 0.4047 MEDQPPPSEASTRRPKRGRPPKQTYREIDLDEDVEERESSHEDFSEPRRIPKPKRPRNNEAAPSPSLKPTDQTLIETIKGNGKLIPHVVKLWVESYEKDPRSALVELLIMLFEACGVKYHAKSDLMHEIAVDDVVVDLVNSAKRGEVEDYLNSKKKEVKNFKENLESFWDNLVRECQHGPLFDQVLFDKCMDYIIALSCTPPRVYRQVASLMGLSLVTSYITIANMLGVQRETTRRQLDAEKKKLTEGPRMESLNKRFSEMHEKITLLEEMMRKIFTGLFVHRYRDIDPNIRMSCIESLGAWILSYPSLFLQDLYLKYLGWTLNDKIAGVRKASIRALQNLYDMDDNVQTLGLFTERFSGRMIELADDIDVAVAVQAIGLVKQLFRHQLIPEDDLGPLYDLLIDDPPEIRHAIGALVYDHLIAQKFNSSQSRSIGENDNSSEIHLNRMLRILDEFPPDPILTIYVIDDVWDYMKAMKDWKCIISMLLDENSSISDKSATNLVRLLCASVKKAVGERIVPTIDNRKQYHSKAQKEIFENNKQDITVAMMNSYPSLLRKFISDKAKVSLLVEIVLYMNLEFYSLKRQEQNFKIVLQLMKEAFFKHGDMDPLRACVKAINFCCIESRGELQDFARNKLKELEDEIISKLKSAIKEVVDGGDEYSLLVNLRRLYELQLSRYVPIDTIYEDIVMVLRDFRNMEDEVVGFLLQNMYFHLLWCLQSIIDGKSVSAASVTSLLSKRDTLLQELVYFVVNLATDSNGGKSGSELARRVCTLLAETWCIHRPTIFCKTKLERLGYQPNAYEVQKFWELCQLQFNDSDEVEEDDVNKDVVKDYSEEINRYSVIIAACKLITSNVVPKDYLAPEIISHFVMHGTRVAEIVKYLITFLKTSEDDLAAIFLEALKKAYLRPTIDNAENDNISLVNSFSGCKKLAAQLSGTFIGAARNKHRSDILKLVKDGIEYAFVDAPRYLSFLEAAVIHFVPKLPASDLLEIMKDVERRTENVNKDENPSGWRPYCIFVEALRERCAKNEVFQDEKEGVTVKRRGRPRKLPIMAGKKLFNEHSSSEDEDSISASEQDAQDERGRQEEEVEGTPMIHSARLSSKIRSLRVSREESKGQTDTGNSGRAVDNISASRASGITY* 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0601 1138 MobiDBLite consensus disorder prediction 1 72 - -
Psa3g0601 1138 MobiDBLite consensus disorder prediction 1 30 - -
Psa3g0601 1138 MobiDBLite consensus disorder prediction 40 56 - -
Psa3g0601 1138 Gene3D - 251 572 IPR011989 -
Psa3g0601 1138 MobiDBLite consensus disorder prediction 1050 1138 - -
Psa3g0601 1138 Coils Coil 251 271 - -
Psa3g0601 1138 MobiDBLite consensus disorder prediction 1058 1091 - -
Psa3g0601 1138 ProSiteProfiles Stromalin conservative (SCD) domain profile. 280 365 IPR020839 -
Psa3g0601 1138 MobiDBLite consensus disorder prediction 1114 1138 - -
Psa3g0601 1138 Pfam STAG domain 148 256 IPR013721 -
Psa3g0601 1138 PANTHER LD34181P-RELATED 7 1101 - -
Psa3g0601 1138 PANTHER STROMAL ANTIGEN 7 1101 IPR039662 -
Psa3g0601 1138 SUPERFAMILY ARM repeat 100 902 IPR016024 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0601 K06671 - gmx:100810550 1587.39