Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0586 ATGTTAAGAATTTGCTTAAGAAAAAATCTTCCCTATGCAAGATTATTGTCTACTCAGAGTGGAAGGAAGTTACAAGACAAGGTGGCACTGATAACTGGGGGAGCTAGTGGAATAGGAAAAGCAGCAGCAACAAAATTCATCAATAATGGAGCCAAAGTAGTTATCGCTGATATCGACCAACAACGTGGTCGAGAGACGGCAATGGAGTTAGGACATAATGCAACTTTTATAACTTGCGATGTCACGAAAGAATCAGACATATCCGATGTAGTGGATTTCGCGGTTTCTGAATACAAACAACTTGATATCATGTATAACAATGCAGGAATACCCTGCAAAACACCTCCCAGCATTGTTAATCTTGATCTAGAAACGTTTGACAAAGTCATGGACATTAATGTTCGCGGCGTTATGGCTGGGATCAAGCATGCTGCACGCGTGATGATCCCGCGCGGAACTGGATCCATTCTATGCACTGCTAGTGTCACTGGTGTGATGGGAGGGATGGCGCAGCATACTTACTCGGTATCGAAGTTTGCGGTTATAGGCATTGTTAAGTCTTTAGCTTCAGAGCTATGTAGGCATGGAATCCGAGTCAATTGCATATCGCCTATTGCCATACCTACTTCTTTTGTCATGGACGAAATGAATCAGATATATCCGCATCTTGAGTCTCGACGACTTGTAGAAATTGTTCGTAATGTTGGTGTACTAAATGGAGCAAATTGTGAACCGAGTGATGTTGCTAACGCTGCACTTTACCTTGCATCCGATGATGCTAGGTATGTTAGTGGACATAATTTAGTTGTGGATGGAGGTTTGACATCTTTTAAGAGTTTGGAGTTTCCTGCACCAGATCAAGTGCAGTAG 870 0.4253 MLRICLRKNLPYARLLSTQSGRKLQDKVALITGGASGIGKAAATKFINNGAKVVIADIDQQRGRETAMELGHNATFITCDVTKESDISDVVDFAVSEYKQLDIMYNNAGIPCKTPPSIVNLDLETFDKVMDINVRGVMAGIKHAARVMIPRGTGSILCTASVTGVMGGMAQHTYSVSKFAVIGIVKSLASELCRHGIRVNCISPIAIPTSFVMDEMNQIYPHLESRRLVEIVRNVGVLNGANCEPSDVANAALYLASDDARYVSGHNLVVDGGLTSFKSLEFPAPDQVQ* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0586 289 Pfam Enoyl-(Acyl carrier protein) reductase 33 275 - -
Psa3g0586 289 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 161 189 IPR020904 GO:0016491
Psa3g0586 289 PRINTS Glucose/ribitol dehydrogenase family signature 28 45 IPR002347 -
Psa3g0586 289 PRINTS Glucose/ribitol dehydrogenase family signature 99 110 IPR002347 -
Psa3g0586 289 PRINTS Glucose/ribitol dehydrogenase family signature 148 164 IPR002347 -
Psa3g0586 289 PRINTS Glucose/ribitol dehydrogenase family signature 174 193 IPR002347 -
Psa3g0586 289 PRINTS Glucose/ribitol dehydrogenase family signature 195 212 IPR002347 -
Psa3g0586 289 PRINTS Glucose/ribitol dehydrogenase family signature 238 258 IPR002347 -
Psa3g0586 289 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 25 275 IPR036291 -
Psa3g0586 289 Gene3D - 14 281 - -
Psa3g0586 289 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 13 281 - -
Psa3g0586 289 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 99 110 IPR002347 -
Psa3g0586 289 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 162 IPR002347 -
Psa3g0586 289 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 193 IPR002347 -
Psa3g0586 289 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 13 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0586 Psa-Chr3 53066142 53068096 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0586 22 276 Miscellaneous Gene Families AT4G05530 30.769 3.41e-25 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0586 - - gmx:100814306 447.203