Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0582 ATGCAGGTAGCACCGGTGATAATAATCGGAGCCGGAACTTCCGGCATAGCCACGGCAGCTTCTTTAACAAAACAATCCATACCATTCATCATTCTCGAAAGAGAAAACTGTTTTGCTTCTCTATGGCAAAACTACACCTATGATCGTCTTCATCTTCATCTAAGAAAGCAAATTTGCGAGTTACCATATTTTCCATTTCCATCTTCTTATCCTAACTACGTACCAAAAAAGCAGTTCATACAGTATCTAGACAGCTATGTTAAAAACTTCAACATCGATCCTTTATACAACAGAAAGGTTGTGTTAGCGGAGTATTTTGAGGATGATGAGAAATGGAGGGTTGAGGCTGAGAATAGAAGTTCCGGTGAAGTTGAAGAATATTCTGGAAGGTTCTTGGTGGTGGCTAGTGGCGAAACGGCTGAGCCTCGTGTACCGGAAGTTTTAGGGTTGGAGAGTTTCAATGGGAAAGTGATGCATTCGACTGGGTATAAAAATGGGAGAGAGTTTAAAGATAAACATGTTCTTGTTGTTGGTTCTGGGAATTCTGGTATGGAGATTTCTTTAGATTTGGCTAATTTTGGTGCCAAACCTTCTATCATTGTTAGAAGTCCGGTTCATTTTCTTTCAAGGGATATGATGTATTATGCTGGTGTTTTGATGAGTTATCTGTCACTAAGCACAGTGGAGAAACTAGTTGTGATAGTTAGCAGAATTGTGTATGGAGATCTGAGTAAATATGGTATACCTTTCCCTAGTGAGGGTCCTTTCACTATGAAGAATAAGTATGGAAAATTTCCTATAATTGATTTGGGAACGGTTAAGAAAATCAAATCTGGAGAGATACAGGTGTTGGGAGCTGAAATAGAGAGTATAAGAGGTAATCAAGTGTTGTTCCGTGATGGAAAATCCTACCCATTTGACTCCATTATATTCTGTACAGGCTTCAGCAGATCAACTCAAAAATGGCTTAAGGGAGGTGATGATCTTTTGAATGAGGATGGTTTTCCAAAGCCTGGTTTACCATACAATTGGAAGGGTAAGAATGGTTTGTACTGCGTTGGATTGTCAAGGAGGGGGTTTTATGGAGCTAACCTTGATGCTCAAAATGTAGCAAATGATATTGCCTTGTTAGTTCCTCAAGACGAAAGAAAATGA 1155 0.3939 MQVAPVIIIGAGTSGIATAASLTKQSIPFIILERENCFASLWQNYTYDRLHLHLRKQICELPYFPFPSSYPNYVPKKQFIQYLDSYVKNFNIDPLYNRKVVLAEYFEDDEKWRVEAENRSSGEVEEYSGRFLVVASGETAEPRVPEVLGLESFNGKVMHSTGYKNGREFKDKHVLVVGSGNSGMEISLDLANFGAKPSIIVRSPVHFLSRDMMYYAGVLMSYLSLSTVEKLVVIVSRIVYGDLSKYGIPFPSEGPFTMKNKYGKFPIIDLGTVKKIKSGEIQVLGAEIESIRGNQVLFRDGKSYPFDSIIFCTGFSRSTQKWLKGGDDLLNEDGFPKPGLPYNWKGKNGLYCVGLSRRGFYGANLDAQNVANDIALLVPQDERK* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0582 384 Gene3D - 2 379 IPR036188 -
Psa3g0582 384 PRINTS FAD-dependent pyridine nucleotide reductase signature 6 25 - -
Psa3g0582 384 PRINTS FAD-dependent pyridine nucleotide reductase signature 173 191 - -
Psa3g0582 384 Pfam Flavin-binding monooxygenase-like 6 316 IPR020946 GO:0004499|GO:0050660|GO:0050661
Psa3g0582 384 SUPERFAMILY FAD/NAD(P)-binding domain 170 375 IPR036188 -
Psa3g0582 384 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 3 384 - -
Psa3g0582 384 PIRSF FMO 3 325 IPR000960 GO:0050660|GO:0050661
Psa3g0582 384 PANTHER FLAVIN-CONTAINING MONOOXYGENASE 3 384 - -
Psa3g0582 384 SUPERFAMILY FAD/NAD(P)-binding domain 6 214 IPR036188 -
Psa3g0582 384 PRINTS Pyridine nucleotide disulphide reductase class-II signature 5 27 - -
Psa3g0582 384 PRINTS Pyridine nucleotide disulphide reductase class-II signature 169 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0582 Psa-Chr3 52822357 52824838 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0582 K11816 - gmx:100777958 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0582 3 52822357 52824838 Psa3g0582 3 52822357 52824838 ECH