Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0574 ATGCACTTCCAACCTCCCCACCTTTCTCATTCACTCATTGACCCTCCTTTCCTTCTCACAGTTATTATACACATCTTTGTATATATATACTTTATCTTTCGTTACACAACAAAACTAAAATATTTATTACTTAACTCTTCAAGATTACTTGCTTACTACTATATGGGAAGCCAATCTAAGGGCAGTGTGGATGGAGTTCAAAGTGATGTGAAGGTTGTAGAGAATATGGCAACTAAGAAGAGTGGTGTTTATGATTTGTTGCTTAGGGTTCTTTGCTTCTTGCTCACTCTCACTGCTACTATCATTGTTGCTGTCGGTAAGGAAACTAAGGATATTTCCTATGCCTCGTTTCAGTTCAAAGCTACTGCTAAATGGGAATATATGTCTGCTAGTGTGTTTTTCTTGGTGACAAATGTTATAGGATGTTCATACGCAGCAACAACAATGGTGATTTCAACCATTGCAAGAAACAGTGGAAACAAAACAATACTATTGATGATAACAATACTAGATCTTGTTATATCTGCATTACACTTCTCAGCCAATGGAGCAGCTGCTGCAGTGGGAGTGTTAGGGCAGAAAGGAAACTCGCACGTGCAATGGATGAAAGTGTGTAATGTATTTGATGCCTATTGTCGTCACATGACTGCTGCTTTGGTTCTCTCTATCATTGGTTCATCTGTCTTCCTTTTGCTTGTGGCTCACTCTATTTTCAGACTCCATTATTCTAGATCATACTAG 741 0.3846 MHFQPPHLSHSLIDPPFLLTVIIHIFVYIYFIFRYTTKLKYLLLNSSRLLAYYYMGSQSKGSVDGVQSDVKVVENMATKKSGVYDLLLRVLCFLLTLTATIIVAVGKETKDISYASFQFKATAKWEYMSASVFFLVTNVIGCSYAATTMVISTIARNSGNKTILLMITILDLVISALHFSANGAAAAVGVLGQKGNSHVQWMKVCNVFDAYCRHMTAALVLSIIGSSVFLLLVAHSIFRLHYSRSY* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0574 246 Pfam Casparian strip membrane protein domain 82 226 IPR006702 -
Psa3g0574 246 PANTHER CASP-LIKE PROTEIN 1E1 62 242 - -
Psa3g0574 246 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 62 242 - -
Psa3g0574 246 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 86 239 IPR006459 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0574 Psa-Chr3 52259765 52261150 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0574 - - var:108328473 231.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0574 3 52259765 52261150 Psa3g0574 3 52259765 52261150 ECH