Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0564 ATGAACACTTTCACGGCGAGCTTCACCGCCCGAACATGGAGCACACGCCGCGACGCAATTCCGTTAAAACACCGCTCACTTCACCACTTCCTTAACAGACGCGTCACGTTTCTTCCCACCAGAACCACTCTCCCATCTACTAGATTCGTATGCATGGCGGAACCTTATCTACTTTTGAAGCTTGAATCTGCTGAGAAAACATGGAAAGAACTATCGGTGAAGCTTGCTGATCCAGACATTGTTTCTAATCCCAGTGAGTATCAGAAGTTAGCACAATCGGTGTCCGAGCTTGACGTGGTTGTGTCTTTGTATAAGAAATTTAAAGACTGTGAGAAGATGCTGGAAGAAACCAAAGCCTTAACAAAGGATGCTGGCAATGATGAGGATATGGCGGAAATGATATCTTTCGAAATTGAATCTTTGTCCAAGCAACTCTCTGAGCTAGAGGACAAGCTGAAGGTTTTACTGCTTCCCAGTGATCCTCTAGATGCAAGAAACATAATGCTTGAAGAGCTTCTTAGATCTACAACAATGTCAAAAACCAATTCCACACAAACGTCAATGCCAAATCAACCAGTATTTGATGCCAGCACGAGGAACATCTTCAAGACGAGACATCAAGTCACGGTCAAATTGGATGAAGATGATTTTCGCTTGTGGAAGCAACAAGTCGAAGGAGTTATTGACTTTAGATGGGATGGGATTCACAAATATATGTTTGCGCACACCAATGTGAAATCTAGGCAACTCAGATCGGAACTGAAAAGCGTCATAAAAGTAAGAGCAGGTACTGGTGGTGACGAGGCTGGAATATGGGCTGGTGATCTTGTCCGAATGTATGAAAAATTTAGTGAACGGAATTCTTGGAAGCATTCTGCCATTTCATGCTCTGAGGCAGAAAAAGGGGGATACAAAACTTATGTGATGGAGATAAAAGGAAATCGTGTCTATAGTAAATTAAAATACGAATCTGGTGTCCACCGAGTTCAACGTGTTCCTCTAACAGAAACACAGGGCCGCATACATACTTCTACTGCAACAGTGGCCATCATGCCAGAGGTTGATGAAGTTGAAATCGTAATTGACCCGAAAGATATTGAACTGACAACGGCACGTTCTGGGGGTGCAGGAGGCCAGAATGTTAATAAGGTTGAAACAGCAATTGATCTTGTTCATAAACCAACGGGAATCCGCATCTTTTGTACTGAACAAAGGACTCAGAATCAGAACAAGAATCTTGCTTTTCAGTTACTACGAGCCAAACTATATGAGATAAAATCGAGGGAGCAGCAAGAGTCAATACGAAACCAAAGAAAATCACAGGTTGGTACAGGATCGCGTTCAGAAAAAATCCGGACATACAATTTTAAGGAGAACAGGGTTACTGACCACAGATTGAAGAGGAACTTTGAGCTCACCTCTTTTCTAGCTGGTGACATAGAGGATGCTGTTCAGTCTTGTGTTTCGCTGGAACAAAAGGGTCTTATGGAAGAACTTGTTGAGTCTATGGGTGCTTCTACTAAATAA 1527 0.427 MNTFTASFTARTWSTRRDAIPLKHRSLHHFLNRRVTFLPTRTTLPSTRFVCMAEPYLLLKLESAEKTWKELSVKLADPDIVSNPSEYQKLAQSVSELDVVVSLYKKFKDCEKMLEETKALTKDAGNDEDMAEMISFEIESLSKQLSELEDKLKVLLLPSDPLDARNIMLEELLRSTTMSKTNSTQTSMPNQPVFDASTRNIFKTRHQVTVKLDEDDFRLWKQQVEGVIDFRWDGIHKYMFAHTNVKSRQLRSELKSVIKVRAGTGGDEAGIWAGDLVRMYEKFSERNSWKHSAISCSEAEKGGYKTYVMEIKGNRVYSKLKYESGVHRVQRVPLTETQGRIHTSTATVAIMPEVDEVEIVIDPKDIELTTARSGGAGGQNVNKVETAIDLVHKPTGIRIFCTEQRTQNQNKNLAFQLLRAKLYEIKSREQQESIRNQRKSQVGTGSRSEKIRTYNFKENRVTDHRLKRNFELTSFLAGDIEDAVQSCVSLEQKGLMEELVESMGASTK* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0564 508 PANTHER PEPTIDE CHAIN RELEASE FACTOR APG3, CHLOROPLASTIC 257 506 - -
Psa3g0564 508 PANTHER PEPTIDE CHAIN RELEASE FACTOR APG3, CHLOROPLASTIC 7 170 - -
Psa3g0564 508 Pfam RF-1 domain 355 465 IPR000352 GO:0003747|GO:0006415
Psa3g0564 508 SUPERFAMILY Release factor 251 494 IPR045853 -
Psa3g0564 508 SUPERFAMILY Release factor 66 170 IPR045853 -
Psa3g0564 508 MobiDBLite consensus disorder prediction 429 450 - -
Psa3g0564 508 ProSitePatterns Prokaryotic-type class I peptide chain release factors signature. 372 388 IPR000352 GO:0003747|GO:0006415
Psa3g0564 508 Coils Coil 131 151 - -
Psa3g0564 508 PANTHER LD18447P 257 506 - -
Psa3g0564 508 PANTHER LD18447P 7 170 - -
Psa3g0564 508 Gene3D - 258 484 - -
Psa3g0564 508 Pfam PCRF domain 253 348 IPR005139 GO:0006415
Psa3g0564 508 Pfam PCRF domain 65 170 IPR005139 GO:0006415
Psa3g0564 508 SMART PCRF_a_2 119 323 IPR005139 GO:0006415
Psa3g0564 508 Gene3D - 354 449 - -
Psa3g0564 508 Gene3D - 51 161 - -
Psa3g0564 508 MobiDBLite consensus disorder prediction 436 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0564 Psa-Chr3 50863205 50872754 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0564 K02835 - gmx:100777225 437.958