Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0563 ATGCTTCATCAAACTTCCACCCGTCTTCTCAACGGCTTTTTCCATCACCAACACCACTTCTCCTTCACCAAACCAATCTCTCGATTCCCTTTCTCACTCCCCAAGGTTCTATCCATGGCAACATCTCATTCCAACCAACACAACTTCACCAATCGTCTTGCTTCCGAACAAAGCCCTTATCTTCTTCAGCACGCTCATAACCCTGTTGATTGGTATCCATGGGGAGATGAAGCTTTCGCTGAAGCACGACGTCGAGATGCACCTATCTTCTTATCAATTGGGTACAGCACTTGTCATTGGTGTCATGTTATGGAGGTTGAGTCTTTTGAGGATGAGAGGATTGCGAAATTGTTGAATGATGGGTTTGTTAGCATTAAGGTGGACCGTGAGGAGCGGCCGGATGTTGATAAGGTATACATGACGTATGTGCAGGCTTTGTATGGTGGAGGAGGTTGGCCCCTGACTGTGTTTCTTTCACCTGACTTGAAACCTTTAATGGGTGGAACTTACTTCCCCCCTGATGATAAATATGGTCGACCTGGTTTTAAGACTATACTCAGAAAGGTAAAAGAGGCTTGGGAAAGTAAGAGGGATATGCTAGTTAAGAGTGGAACATTTGCAATTGAACAGCTTTCGGAGGCATTGTCTACTAGTTCAGATTCTGGTAAATTGCCTGATGGTGTTTCTGACGAGGCATTACGTCTATGCTCAGAGCAACTCTCTGAGAACTATGATTCAGAATTCGGCGGTTTTGGATCTGCCCCAAAATTTCCAAGACCGGTTGAGATCAACTTGATGTTTTACAACTCGAAAAAGTTGGAGGATACCGGAAAATTAGATAGATCTAAGGAAAGTCAGAAAATGGTTTTCTTTACATTACAATGCATGGCAAAAGGAGGCGTCCACGATCATGTTGGAGGGGGGTTTCACAGATATAGCGTGGATGAATGCTGGCATGTTCCACATTTTGAGAAGATGCTTTATGATCAGGGGCAGCTTGCTAATGTTTATTTAGATGCTTTTTCTATCACAAAAGATACCTTCTATTCATCTATATCACGGGATATCCTGGACTATTTGAGGAGAGACATGATTGGTCCAGAAGGTCAAATATTTTCAGCAGAGGATGCTGACAGTGCAGAGACTGAAGGGGCTACACTTAAAAAGGAAGGATCCTTTTACATATGGACCAGCGAAGAGGTTGAAGACTTACTTGGAGAGCATGCTGCTCTTTTTGAGGAGCACTATTACATAAAACAGATGGGTAACTGTGACCTATCTGAAATGAGTGATCCTCACCATGAATTCAAGGGAAAGAATGTCCTGATTGAGAGGAAGGATCCTTCAGAAATTGCATCAAAATATGGTCTGTCGGTTGAGACATATCAAGAAATTCTTGGAGAATGCAGGCGTAAGTTGTTTGAAGTACGGTTGAGGCGCCCAAAGCCACATTTGGATGATAAGGTTATTGTATCTTGGAATGGACTGGCAATCTCATCTTTTGCTAGGGCTTCTAAGATTCTAAAGGGTGAAGCTGAAGGGATCAAATTCAACTTTCCTGTTGTTGGCACTGAACCAAAGGAGTACTTGAGAATAGCAGATAAAGCAGCATCCTTCATTAGGAATCAACTTTATATTGCAGAGACTCGCAGACTACAACACAGTTTCAGAAACACTCCATCTAAAGCTCCTGGTTTCTTGGATGATTATGCTTTTTTGATTTCTGGATTGCTGGATCTCTACGAATTCGGGGGTGGAATCAACTGGCTCTTATGGGCCATTGAATTACAGGAAACCCAGGATTCTTTGTTTCTAGATAGGGATGGAGGCGGATATTTCAATAATACAGGAGAAGATTCTTCAGTTCTTCTCCGTGTGAAGGAAGACCATGACGGGGCAGAACCGTCGGGGAACTCTGTCTCTGCAATAAATCTTATAAGGTTGGCTTCCATGGTTTCTGGAAGTAAGGCAGATTACTATAAGCGAAATGCAGAACATCTATTGGCAGTTTTTGAGAAAAGATTGAAAGATATGGCCATGGCAGTGCCTTTAATGTGTTGTGCAACAGACATGCTGCGCTTGCCTTCCCGGAAGCAAGTGGTGGTGGTGGGCGAAAGGACTTCCGAGGAATTTGAAAACATGCTTGCCGCAGCTCACACATTATATGATCCCAACAGAACAGTTATTCATATAGATCCCAACAGCAAAGAAGATATGGAATTTTGGGAAGTAAATAACAGCAATATTGCTCTAATGGCCAAGAATAACTGTGCAGTTGGCAAGGTTGTAGCTCTTGTATGCCAAAACTTCACTTGTAGTGCCCCTGTGACTGATCATTCATCACTTGAAGCTTTGCTCTCCCAAAAATTCCCCTCTTAA 2379 0.4288 MLHQTSTRLLNGFFHHQHHFSFTKPISRFPFSLPKVLSMATSHSNQHNFTNRLASEQSPYLLQHAHNPVDWYPWGDEAFAEARRRDAPIFLSIGYSTCHWCHVMEVESFEDERIAKLLNDGFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLTVFLSPDLKPLMGGTYFPPDDKYGRPGFKTILRKVKEAWESKRDMLVKSGTFAIEQLSEALSTSSDSGKLPDGVSDEALRLCSEQLSENYDSEFGGFGSAPKFPRPVEINLMFYNSKKLEDTGKLDRSKESQKMVFFTLQCMAKGGVHDHVGGGFHRYSVDECWHVPHFEKMLYDQGQLANVYLDAFSITKDTFYSSISRDILDYLRRDMIGPEGQIFSAEDADSAETEGATLKKEGSFYIWTSEEVEDLLGEHAALFEEHYYIKQMGNCDLSEMSDPHHEFKGKNVLIERKDPSEIASKYGLSVETYQEILGECRRKLFEVRLRRPKPHLDDKVIVSWNGLAISSFARASKILKGEAEGIKFNFPVVGTEPKEYLRIADKAASFIRNQLYIAETRRLQHSFRNTPSKAPGFLDDYAFLISGLLDLYEFGGGINWLLWAIELQETQDSLFLDRDGGGYFNNTGEDSSVLLRVKEDHDGAEPSGNSVSAINLIRLASMVSGSKADYYKRNAEHLLAVFEKRLKDMAMAVPLMCCATDMLRLPSRKQVVVVGERTSEEFENMLAAAHTLYDPNRTVIHIDPNSKEDMEFWEVNNSNIALMAKNNCAVGKVVALVCQNFTCSAPVTDHSSLEALLSQKFPS* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0563 792 PANTHER SPERMATOGENESIS-ASSOCIATED PROTEIN 20 40 788 IPR024705 -
Psa3g0563 792 Pfam Protein of unknown function, DUF255 50 210 IPR004879 -
Psa3g0563 792 SUPERFAMILY Six-hairpin glycosidases 238 633 IPR008928 GO:0005975
Psa3g0563 792 SUPERFAMILY Thioredoxin-like 49 194 IPR036249 -
Psa3g0563 792 Gene3D Glutaredoxin 49 220 - -
Psa3g0563 792 PIRSF UCP006402_thioredoxin 32 792 IPR024705 -
Psa3g0563 792 CDD SSP411 72 194 IPR004879 -
Psa3g0563 792 Gene3D - 521 698 IPR012341 GO:0005975
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0563 - - gmx:100777751 1374.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0563 3 50828028 50833813 Psa3g0563 3 50828028 50833813 ECH