Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0557 ATGATTTCTGCTGGAGATAGGGATGAAATAAAGGGATTAGGGTTAGGGTTAGGGTTAGGGTTGGGTAGTAGAAGGAGAGAGATGGTGGAGTCTGAGCTTGAAGAAGGTGAAGCTTATTCATATCAGAACCGTGAAGATTATGACGCCACTGTTGATCCTGATGTTGCCCTCTCTTACATTGATGACAAAATTCAAGATGTCCTTGGACACTTTCAGAAAGATTTTGAAGGCGGGGTGTCCGCAGAGAATCTGGGGGCGAAATTTGGTGGTTATGGATCGTTTTTGCCTACCTATCAGCGCTCTCCTGCTTGGACTCATCCAAGAACTCCACATAAAAATCATACTCAAAATTCGCCTAGATCTCCGAATAACTTCAATTCAGAGATTGGACAAGGGGATGCTGTACAATGTTCAGCTGGAGCTCAATTATCGAGACTTGGACCTGGTTCTGCTACTTCCTCGAGGCTGTCTGCAATAAAGGGACTCTCTTTAGATGATGGAACCAATCACGAAAAATGTCCGGCAATCACTAATGCCGAGGCATTAAATTCTAAGTACGATTCTCTAAACACGAAAGCCGGCAGCATATCAGACCAGAAACCACTGAAAGTTCGAATAAAAAATGCTGCTATATACAGTGGACTTGGTCTTGATGTGTCACCGTCTCCATCACCGGATGACAGCCCCTCAGAAAGTGAAGGAATTTCTCGTGGTCATCTAGACGATCCCTTTGAATCTCCTACCAGTATCATTAAGATTATGACAACCCTCCCTAAGCTGTTGTCGCCCCTTCCTGATGATCTCATTGAATTAATTGAGAAGGAAATGCGTACCAGAGACAGCATCCCCGGTCTTGTTCATATTGATGACAAAGAAAGTTCCGGCATGTTACCAAATGAATCTAATGCTGTAAAAGGTGACAGAAAATTGTTCGGAGGGAAAAGAGTGAAGTCCCTACAGGGTTATGAGTCCTCGATGGAAGTCAAGGGTTTCAATAAGAAGAACACTCGTAATGATGTTGGAGGGTCGTCAAGGAAAGAACAAAATGCAGATGCATTGAATATGGAGGAACTGGTTTCAAAAACCATGAAAAATCCACTTTTGTCCAATTCATATCCTTTCTGCGATGATCCGGTAAAGGACGCAGATGGGCCATGTAATTCGTTGAAGGAAGCCAAGGGTGCGGTGAAGGAGAAAACTTTGTCGGACCAAGCACAAAAGGAACAGGTGGATCACGCATCTGCGGAAGTGAATGGTTTTTCTGAGAGGGCAAAAGGAGGTTCTGGAAGGAAAGTTGTGGGTGATAAGGTTTTGCTTGATGACACAATAAAAGCTGAATCTAATGTTTCCAAAGTTAGGACAACATCAAACACTGAATGTGTAGAACAACCTCCTAAGACGGTTAATCAGAGAGGTAGCCTGGGCGAACAAGACAGTACGGCATTGCCTTTCTTGACGGAACATCCTTATCCCGGGGGAAAGAAGAAGTCAAAGGGAATGCATGACACCATGGTTATAGAGAGGGAAAAAGAAAACCTGAAGGTTGGATCCTCTTTGATTCCCAAACCAAAAAGGAGTTCTGATGATAGTTATACATCAAAAAATGGAATTGAAGATGTCAAAGTCAAAGTACAAACATCAAAAAATGGAATTGAAGATGTCAAAGTACAAAAGAGTTCTGAAAAGGCTAGGGATGCGTATAGAGATTTCTTTGGAGAATTGGAAGAAGATGAAGACAAATTTGATTCACTGGAAACCCCTTATGAAGATAAACCGAAGGAATCTGAGGCAGCTGTGAGGAGTGTGGCTGAAACAAATCTTGGAGCAAAGGAGAGATCAGGTGGTAAGAAAATTGATAAGCCATTGGCAGCAGAAGTAAACCCTAAAACAGCCACAAATGGCTGGTGCACTGGAAATGCGCCTAGTACTGTTGTGGGAAATGGAAATGGGGTTCCTGCGATGTTGCCTCCTGTTGAGATGGAAGATAATTGGGTACAGTGTGACAGGTGTCATAAATGGCGTCTTCTTCCTGCTGGCAAAAATCCTGAAAGCCTACCTGAAAAGTGGCTGTGTAGCATGCTTAATTGGCTGCCTGACATGAATCGATGTAGTTTTAGTGAGGATGAAACCACTAAAGCCCTTTTTTCTCTATACCAAGGGCATTCTCTTGATGCTCAAAACAACCTGCAAAATGTCTCGGGAAGTATTCTGGTATCAGGAACTGGGGCAACTTTGCAGCATCCTGGTCAACGCCAGCTAAATAATGATATGCATGCTGCGCCTGGTGGGAAGAAAAAAGTTGTGAAAGAAATTTCAAATTCTTCAAATAAAGAAGGCGTTTCTCAATATTCTCATTCTATAAAGAAAAACCCTCAGTCATCAGTGAAAAGTCGGAGCTTAAATGACGTGAACAAATCTCCTGTTGTGAGTGAGGCTGATGCTCCAGGGGAGAAACACAAAAATAAGCCGAGGATGCCGGAGTACAATTCTGATAGAGGTGATGTGAAGAATATGAAAAGCAGGAGGGATCCTGATGAAGATGGTTCGAGGCCATCCAAGAAAAGTAAGACTGACTTGGTTCAATCTGCTGATAAAGAGTGGATTCCAGAACAGAATGGAACCTCTAGGAAGGTCAATCATAGCTCAAACAACACTTTGCCAACTACTTCAGCTGGCAAAGATCGATCTAGACAGAGAGACCGCTCCTCTTCGAGTGACTCCAAATTCGGAAAGGACAGGCCGCCGGTTTCTGCTGAAAAGAGAAAAGACAAGGGTCGGGATTCCTTGGATGAGGGGTCCCTAGATTTGGGGAATTATGGTTCTAATGGTAGTGTAAAAAAGAGGAAATTGAAGGACTATCAGGATGCTCAAACTCGTAGCACAGGTAATCCTTTCCCACACGAGAGAAGAACTTCTGAGCAGGAGTTCAGTGACTCCAGGAAGGAAAAGAAAGCAAGAAATTCAAGATCTGAAGGCAAAGAATCAAGTGCTAGTAAAGGCAGTGGCAGGACTGACAAAAAAGTTGGTCATACAAAGAACCATAGTTCCAAGCAAAATCCTGGGAGCAATCATTCACATCGGAGCATGGATGGCATGGAAAGTTCGAAAAGGGACTCGGGGTCCGTACAGGTTTCTGTTGCGGCCACATCCAGCTCTTCTAAGGTCTCTGGCTCACATAAAACCAAAGCCAGCTTCCAGGAAATGAAGGGCTCCCCTGTGGAATCAGTTTCCTCCTCGCCTTTAAGAATTTTAAGTACAGATAAGTTTTCAAACAGAGAAGTTATGGGGAAAGATGTGCCTCGTGATATTGCTGCTGTGGATAGTCCGAAAAGATGCTTAGACGGGGAAGACGATGGTGCAAGTGATCGTTCGGAAACAGCTAGGAAGGAAAAATCTTTCTCCATGGCCCACAGGTCTGATTTTCAGGGCAAGGGTGTTAATCACATATCAGATACTAAGCCTAAAGCGCAAACAACCAGCCATTATACCAATGGTAGTGCTGAAATTATGGCCCCGAATGGGACATATCCAGGTGCAGAGCAGATTAAGGATCAGGGCGAAGACAGGACTGGTGTTCATTATGCTAACGCTAGTGTGTCTCACGCAAGGAAAACTGGCATGGAATCAGATTTGGAGGAAAACAAGCAGGGCTGTAAGTCAGAGCCCCCTGAAGTAAAAGTCAAGAGCTCTAGTTCTCCTAGTCAACTGCCAGATCAGTCTCCTCTTTGTGAGACAAAGCGTAGGGATGGAAAAGTTAAGTTGCAGGATAAGTTCGGGCTCAAGCCTGACCAGAATGAGAATATTCATGCTAGCAAAAAAGACTTAACAGGAAAAAATGAAAGTAGGAAAAAAGAGAATCACGGAAAGAGGGAGCGTGATTCTCAAGAGGTTCGTGTTGAAGCCCTAAGCAAATGGGAACCATTACATGCACCCAGTAAGAATCAGTTGGCAGACTGTGATGCCGAAAGATCTTCAAAGAGGTCTCTTTTGGAAAGACCGGATCAAGAAGTGCTTGGAAAAGGGAAGTCTCAAGTTGAGATTTTGAGTCACTGCCCACGACCAGTCGCTGGTTCCCATAGAGTGAATGGAGATATGGAAGTTGATCCGTCCAAAGCTGATGATGCGTCAAAGCTGCAAAAAAAGCAATTAAAAAAGGCTGATCATCAAAATGGAACTCAGCAAATTGGTTCCAAAAACCATGCAGTTAATGGACACAGATCCAAGGAGCTCGATGCCCCTAGTCCACTTAGAAAGGATTCTTACACACATGCTGCTAACAATGCTGTTAGAGAAGCTAAAGATCTTAAGCACCTGGCTGATCGTCTCAAGAATTCTGGATCCGCTCATGAGAGCACAAATCTGTACTTCCAGGCAGCCCTTAAGTTTCTTCATGGAGCCTCTCTATTAGAATCTGGTAACAATGATAATGCAAAACATAGTGAGATGATTCAATCAAAGCAGATGTACAGTAGCACAGCAAAATTGTGCGAGTTTTGTGCCCATGAATATGAGAAATCAAAAGACATGGCTTCAGCTGCTCTGGCCTACAAATGCACGGAGGTGGCATATATGAGGGTAATATATTCTTCGCACACTAGTGCAAGCAGAGATCGGTATGAGTTGCAGACTGCCCTGCAAATGACTCCTCTTGGTGAATCTCCATCATCATCAGCCTCTGACGTTGACAATGTTAACAACTCTACAGCAGCTGACAAAGTTGCCCTATCCAAGAGTGTCAATTCACCTCATGTTGCTGGAAACCATGTTATTGCTGCACGAAGTCGTCCCAATTTTGTGAGGATACTTGGTTATGCTCAGGATGTGAATTTTGCCATGGAAGCCTCAAGGAAATCACGGAATGCTTTTGCAGCTGCTGATGCAAGCATGGGTGTGGGTAAGAACGCCGATGGTATTTCTTCTATCAAGAAGGCTCTTGATTTTAGCTTTCAAGATGTGGAGGGGTTACTACGTCTGGTACGGCTTGCTGTGGAGGTCATTCATCGTTAA 5007 0.4388 MISAGDRDEIKGLGLGLGLGLGSRRREMVESELEEGEAYSYQNREDYDATVDPDVALSYIDDKIQDVLGHFQKDFEGGVSAENLGAKFGGYGSFLPTYQRSPAWTHPRTPHKNHTQNSPRSPNNFNSEIGQGDAVQCSAGAQLSRLGPGSATSSRLSAIKGLSLDDGTNHEKCPAITNAEALNSKYDSLNTKAGSISDQKPLKVRIKNAAIYSGLGLDVSPSPSPDDSPSESEGISRGHLDDPFESPTSIIKIMTTLPKLLSPLPDDLIELIEKEMRTRDSIPGLVHIDDKESSGMLPNESNAVKGDRKLFGGKRVKSLQGYESSMEVKGFNKKNTRNDVGGSSRKEQNADALNMEELVSKTMKNPLLSNSYPFCDDPVKDADGPCNSLKEAKGAVKEKTLSDQAQKEQVDHASAEVNGFSERAKGGSGRKVVGDKVLLDDTIKAESNVSKVRTTSNTECVEQPPKTVNQRGSLGEQDSTALPFLTEHPYPGGKKKSKGMHDTMVIEREKENLKVGSSLIPKPKRSSDDSYTSKNGIEDVKVKVQTSKNGIEDVKVQKSSEKARDAYRDFFGELEEDEDKFDSLETPYEDKPKESEAAVRSVAETNLGAKERSGGKKIDKPLAAEVNPKTATNGWCTGNAPSTVVGNGNGVPAMLPPVEMEDNWVQCDRCHKWRLLPAGKNPESLPEKWLCSMLNWLPDMNRCSFSEDETTKALFSLYQGHSLDAQNNLQNVSGSILVSGTGATLQHPGQRQLNNDMHAAPGGKKKVVKEISNSSNKEGVSQYSHSIKKNPQSSVKSRSLNDVNKSPVVSEADAPGEKHKNKPRMPEYNSDRGDVKNMKSRRDPDEDGSRPSKKSKTDLVQSADKEWIPEQNGTSRKVNHSSNNTLPTTSAGKDRSRQRDRSSSSDSKFGKDRPPVSAEKRKDKGRDSLDEGSLDLGNYGSNGSVKKRKLKDYQDAQTRSTGNPFPHERRTSEQEFSDSRKEKKARNSRSEGKESSASKGSGRTDKKVGHTKNHSSKQNPGSNHSHRSMDGMESSKRDSGSVQVSVAATSSSSKVSGSHKTKASFQEMKGSPVESVSSSPLRILSTDKFSNREVMGKDVPRDIAAVDSPKRCLDGEDDGASDRSETARKEKSFSMAHRSDFQGKGVNHISDTKPKAQTTSHYTNGSAEIMAPNGTYPGAEQIKDQGEDRTGVHYANASVSHARKTGMESDLEENKQGCKSEPPEVKVKSSSSPSQLPDQSPLCETKRRDGKVKLQDKFGLKPDQNENIHASKKDLTGKNESRKKENHGKRERDSQEVRVEALSKWEPLHAPSKNQLADCDAERSSKRSLLERPDQEVLGKGKSQVEILSHCPRPVAGSHRVNGDMEVDPSKADDASKLQKKQLKKADHQNGTQQIGSKNHAVNGHRSKELDAPSPLRKDSYTHAANNAVREAKDLKHLADRLKNSGSAHESTNLYFQAALKFLHGASLLESGNNDNAKHSEMIQSKQMYSSTAKLCEFCAHEYEKSKDMASAALAYKCTEVAYMRVIYSSHTSASRDRYELQTALQMTPLGESPSSSASDVDNVNNSTAADKVALSKSVNSPHVAGNHVIAARSRPNFVRILGYAQDVNFAMEASRKSRNAFAAADASMGVGKNADGISSIKKALDFSFQDVEGLLRLVRLAVEVIHR* 1669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0557 1668 MobiDBLite consensus disorder prediction 454 475 - -
Psa3g0557 1668 MobiDBLite consensus disorder prediction 1014 1028 - -
Psa3g0557 1668 MobiDBLite consensus disorder prediction 867 892 - -
Psa3g0557 1668 PANTHER CW-TYPE ZINC FINGER 28 1666 - -
Psa3g0557 1668 MobiDBLite consensus disorder prediction 510 536 - -
Psa3g0557 1668 Gene3D - 656 713 - -
Psa3g0557 1668 ProSiteProfiles Zinc finger CW-type profile. 658 711 IPR011124 GO:0008270
Psa3g0557 1668 MobiDBLite consensus disorder prediction 1242 1303 - -
Psa3g0557 1668 PANTHER CW-TYPE ZINC FINGER 28 1666 - -
Psa3g0557 1668 MobiDBLite consensus disorder prediction 1319 1339 - -
Psa3g0557 1668 MobiDBLite consensus disorder prediction 217 242 - -
Psa3g0557 1668 MobiDBLite consensus disorder prediction 1402 1416 - -
Psa3g0557 1668 MobiDBLite consensus disorder prediction 756 1418 - -
Psa3g0557 1668 MobiDBLite consensus disorder prediction 1205 1222 - -
Psa3g0557 1668 MobiDBLite consensus disorder prediction 394 414 - -
Psa3g0557 1668 Pfam CW-type Zinc Finger 663 709 IPR011124 GO:0008270
Psa3g0557 1668 MobiDBLite consensus disorder prediction 394 410 - -
Psa3g0557 1668 MobiDBLite consensus disorder prediction 584 598 - -
Psa3g0557 1668 MobiDBLite consensus disorder prediction 1151 1170 - -
Psa3g0557 1668 MobiDBLite consensus disorder prediction 578 598 - -
Psa3g0557 1668 Coils Coil 1425 1445 - -
Psa3g0557 1668 MobiDBLite consensus disorder prediction 966 1012 - -
Psa3g0557 1668 MobiDBLite consensus disorder prediction 1035 1086 - -
Psa3g0557 1668 MobiDBLite consensus disorder prediction 1091 1137 - -
Psa3g0557 1668 MobiDBLite consensus disorder prediction 1225 1241 - -
Psa3g0557 1668 MobiDBLite consensus disorder prediction 812 863 - -
Psa3g0557 1668 MobiDBLite consensus disorder prediction 1364 1387 - -
Psa3g0557 1668 MobiDBLite consensus disorder prediction 893 931 - -
Psa3g0557 1668 MobiDBLite consensus disorder prediction 773 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0557 Psa-Chr3 50677510 50686482 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0557 - - aprc:113860968 2289.23