Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0549 ATGAATCCTATTTGTTTTGATGGCAACAAACAAGACAGTGAAGTGAAATCTGCTGGAGGATTTCTTACTTCGGATGATCCTGACATGGAAGATGAGTTTGGAGAGCCGGAAGTGGAACCTCGTGTTGGAGACGAGTACCAGGCAGAACTTCCTGCATATATTGGGGAACCATATCGGTCTCAGATTGTAAAGAAAACAGGAGATTCGGAAATTGCGGTCAATATGCCAGAGTCTTTTTCGCTAGGATTACCCCTTCCTCTTATGTGGACGCATTGTGAATTCGATAGAAGTTGCGGTTTTGAGAGTTTAGAATCTGGCACAAGTCGAAAGGGGCGTGTTATTTGTGAAGGAAAAAATGTAGGAGGGTTTTCGAATTTTAAATCCGCTTATAGAAATGGTGAGGCAGATATTGGCTCAGAACTGAGAACTGGACTAGATCAGCCAAGGGGCAGATATCTTCTTCCTGAATTGTTGTGTGGTCAGACTTGGACAGATATTGAATATAACAGTTTTCTCCTTGGCCTCTATGCATTTGGGAAGAACCTTATTTTTTTGAAGAAATTCGTTGGGACTAAAAGTATGGGAGACATATTGTTTTTTTATTACGGTAAATTTTATAAGTCTAAAGGATATTCCAGATGGGCACAATGCCGGAAGTCGAAAACTAGGCGATGTATATTTGGACAGAAAATATTCACTGGTTGGAGGCAACAAGAATTGCTATCAAGACTGTTTTCCCATGTCGCAAAGGACTGTCAAACTACTTTGACTGAGATTTCGAAGAATTTTGGGGAGGGAAAGATGCCATTTGAAGAATACATATTTGCTCTAAAGAATGCTGTTGGCATTGAGGTCCTTATAGTTGCAGTAGGTATTGGCAAAGGGAAGCATGACCTTACAGGCACCGCTCTTGAGCCACCAAAGATCAATCACACCCTTCCTGCCCGCCATGAAATGCCAGCTGGAAAAGCTTGCTCCTCTCTTACATCTGCAGATATAATGAAGATCCTAACAGGAGATTTTAGATTAAGTAAAGCTCGATCTAGTGATCTTTTCTGGGAAGCTGTTTGGCCTCGTCTTTTAGCAAACGGTTGGCATTCTGAAGAGCCAAAGGATAATTTTGTTACTGGAACAAAACAAACTTTGGTTTTTCTTGTACCTGGTGTTAAGAAATTTTCAAGAAGGAAACTGGCCAAAGGTAACCAATACTTTGATTCTATAAGTGATGTACTGAATAAAGTGACATCTGACCCTAGGCTTCTTGAGACTGAAGTTCAAACAACTGAGGGTAGTGCTGATAAGGTAAACATGCAAAACAATCAAAACCAAGATGGTGTGTCAAATACACAACAATGTCCTTTGTTTCAATCTCCCAGTTCAACGTGCAAACCGGATCTCGTGAAATTTACAATTGTGGATACCAGCATGGTTCATGATACCGATCAACATAAAGTGAGACAAATGAAAAGCTTACCTTTTCAACCTGGGAGTATATCTACCATCTCAAGCTGCAGTTCTAGTGAATCTGAGACAACTACATCTGAAGACTCGGAAGATCAGATTAGGCAAGCTAATGCTTCAAGTCCTATTGAAGATCGGGTTGAACAAGCTAATCCTTCACAGCATGCTGAAGATCAGGTTGAACCTGCTAATTCTACATACCATGTTAAAGATCAGGTTGAGAAAAACAACTCTTCGTACCGTATTGAAGATCAAGTTGAACATGCTAATTCTTCGTACCATATTGAAGATCAGGTTGAACATGCTAATTCTTCGTACCATATTGAAGATCAGGTTGAACATGCTAATTCTTCATACTGTGTTGAAGATGAGGTTGAGCAAGCTAATGCTTCAAACCCTATTAAAGGTCAGGCTGAACATACTAATTCTTCCTACCAAGTTGAACATGCTAATTCCTACAACCATGTTGAAGAAATCTCAGATAAGGGGAAGCGCCTAGACTTATCAGGTCATACTCTTAATTTTGATCTGAATGATGATGAGCATACAATGGAGACGAACGAACAGCCATTGATCGAAAAGATGACATCTGATGATTGCAGAAAATATTTTCCATGCACCACAAAAATGCAGGAGTTAAGAGCTTGTAACTATGGAGAGTCTAGCCTTAGTGCTAAAAATACTTCTATCGACAGAAATTTTGATTTAAATGAGCCATTCTCATCGTCAGATCCACTTGATGCATCTGAGGGCATGGATATGTCTGTAGATTTAGAAAGTTTGTCTTTCCCAAGTTATCCGGCTAAAGGCAATAACATGAGCAATGAAGGAAGTGTCACTGAGAATCCCCAGGTTGGAGAAGTTTCTGCGAAAAATTCTGAAAACAGGATGTTGATTGACTTGAATTTTCCTCAAGTTGCACCTGACTTAACACTTGAAATGGAAATACCATCCTCTAAGGCAATACAGCAAAACGATGACCAACGTGCCCAAACATTGTCACCATCATCATCTGAGACAACCCAGCACAACGCAACAGATGAGATTCCTGATTTAAATAAGGAGCACCAACCGATCATTGTTAACCGCCGTCAAAGTACAAGGAACCGACCGTTAACCACAAAGGCATTAGAAGCTCTTGAGTACGGATTTCTCAACTCAAAGAGGAAGAGGAAGAACTCAGAACCTTCAGACAACAATTCTAAGTCGCAATGTCTACGTCCAAGTAACGAGACAATTGTCAGTGCTACTTGTGATGATAACATTGAGAGTTCTATGGCTGACACAAGTGCAAAGGAGGAGAATGTCATCCGGGAATATAGTTTCATTGTTTAA 2796 0.4024 MNPICFDGNKQDSEVKSAGGFLTSDDPDMEDEFGEPEVEPRVGDEYQAELPAYIGEPYRSQIVKKTGDSEIAVNMPESFSLGLPLPLMWTHCEFDRSCGFESLESGTSRKGRVICEGKNVGGFSNFKSAYRNGEADIGSELRTGLDQPRGRYLLPELLCGQTWTDIEYNSFLLGLYAFGKNLIFLKKFVGTKSMGDILFFYYGKFYKSKGYSRWAQCRKSKTRRCIFGQKIFTGWRQQELLSRLFSHVAKDCQTTLTEISKNFGEGKMPFEEYIFALKNAVGIEVLIVAVGIGKGKHDLTGTALEPPKINHTLPARHEMPAGKACSSLTSADIMKILTGDFRLSKARSSDLFWEAVWPRLLANGWHSEEPKDNFVTGTKQTLVFLVPGVKKFSRRKLAKGNQYFDSISDVLNKVTSDPRLLETEVQTTEGSADKVNMQNNQNQDGVSNTQQCPLFQSPSSTCKPDLVKFTIVDTSMVHDTDQHKVRQMKSLPFQPGSISTISSCSSSESETTTSEDSEDQIRQANASSPIEDRVEQANPSQHAEDQVEPANSTYHVKDQVEKNNSSYRIEDQVEHANSSYHIEDQVEHANSSYHIEDQVEHANSSYCVEDEVEQANASNPIKGQAEHTNSSYQVEHANSYNHVEEISDKGKRLDLSGHTLNFDLNDDEHTMETNEQPLIEKMTSDDCRKYFPCTTKMQELRACNYGESSLSAKNTSIDRNFDLNEPFSSSDPLDASEGMDMSVDLESLSFPSYPAKGNNMSNEGSVTENPQVGEVSAKNSENRMLIDLNFPQVAPDLTLEMEIPSSKAIQQNDDQRAQTLSPSSSETTQHNATDEIPDLNKEHQPIIVNRRQSTRNRPLTTKALEALEYGFLNSKRKRKNSEPSDNNSKSQCLRPSNETIVSATCDDNIESSMADTSAKEENVIREYSFIV* 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0549 931 MobiDBLite consensus disorder prediction 1 40 - -
Psa3g0549 931 SUPERFAMILY Homeodomain-like 161 209 IPR009057 -
Psa3g0549 931 MobiDBLite consensus disorder prediction 809 834 - -
Psa3g0549 931 PANTHER ATROPHIN-RELATED 16 925 - -
Psa3g0549 931 PANTHER ARGININE-GLUTAMIC ACID DIPEPTIDE REPEAT PROTEIN 16 925 - -
Psa3g0549 931 MobiDBLite consensus disorder prediction 809 860 - -
Psa3g0549 931 MobiDBLite consensus disorder prediction 492 511 - -
Psa3g0549 931 MobiDBLite consensus disorder prediction 846 860 - -
Psa3g0549 931 MobiDBLite consensus disorder prediction 490 531 - -
Psa3g0549 931 MobiDBLite consensus disorder prediction 874 898 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0549 Psa-Chr3 49905062 49910432 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0549 - - cam:101506286 1139.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0549 3 49905062 49910432 Psa3g0549 3 49905062 49910432 ECH