Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0535 ATGAGAATCGTTGGACTGACCGGCGGAATAGCAAGTGGCAAGAGCACTGTTTCCAATTTATTCAAGTCTCATGACATCCCTGTTGTCGATGCTGATGTAGTTGCTCGTGAGGCTTTGAAGAAAGATAGCGGTGGATGGAAAAAAGTCGTTGCGGCGTTCGGGGAGGAAATTCTTCTAGACAATGGAGAAGTTAACAGACCCAGACTTGGCCAAATCGTTTTTGCGGATCCTGATAAGCGTCAATTTCTCAACCGATTGTTGGCTCCTTATATATCGTCGGGGATCTTTTGGGAAGTTGGGAAGCTATGGTTGAAAGGTTACAAGGTCATTGTTCTTGATGTCCCTTTGTTATTTGAGGCCAAGATAGACAAGTTCACGGCGCCCATCATTGTCGTGTGGGTTGATCCTGAAACACAGATTCAGAGACTCTTGGCAAGAGACAAATCTAGTGAGGAGGATGGTCGGAATAGGGTTAATGCTCAGATGCCACTGGATGATAAAAAGAGTAAAGCTGATATAGTAATAGACAACACCGGTTCACTAGATGACTTGAATGAACAATTTCAGAAGGTTTTGTTCCGGGTCACTGGACCCTTGACATGGTGTGAATTTTGGCGTTCTAGGCAGGGGGTCTCGATCATTCTTGCTTCACTTTCCTCAGGTGTTGTTCTATGTGCGAAGGCATTCAACAACAACAGACTCTTTAAAAGCATTGCAAAACCAATCCACACCAACTTAAACAAACTTTCTCCATCCCTTAATTTCCACTCCACTAAGCTACGTACCAACCAAACTTCATTTCAAATGGCTGCACCCAAACCACCACATGATCATCATCATCATCCACAACTTCCTCCTGCATCAGAAACTCTCAAGTATCAGACGTGGGTTTTGAAAGTCTTGATCCACTGCGATGGCTGCACGAAAAGAATCAAGAAAATTCTTCAAGGAATTGAAGGGGTTTACACGACAGAAGTTGATTCTATGCAGCACAAGGTTACAGTTACAGGCAACGTTGAAGCTGAGACTCTCATCAAAAAGCTTTCAAGATCAGGAAAATCAGTGGAACTTTGGCCACAAAAACCACCTGAGAAGAAAGATAAAAAACCTTCAACAAAATCAAAGGAAGAGATCAAGGAAGGTGAAAAGAATAGTACTGAACCAGTTGGAGAAAGTAGTCATGAAGATTGTATAGATGATGTAGGTGATGATGGTGGTGAAGAAGATTCAAATCATAATGATGATGATGATGGTGGTGGTGGTGGTGATAATAAAAGTGAAGGGGGTGCTAAAAAGAAGAAGAAAAAGAAAAAGAAGAATAAAAGTGGTTCTGTAACTTCTGTTCCTCTTAATAATAATGATGGAGGAGAAAAAGTGATTCTTAGTACAGAAAAAGTTGCTACTCCCAAGGAAATTATTGTCCCTCCAGTACTTGAGCAACATCATGGCTATAATAACCCATATCCACCACATATGTACTATTCACACCCTCCTCTTGCTCATGCACCACCACCTTATGGGTTAAGCTATAACACATCCTATCCTGTTTCAACTACTTCTGCTTATTATGTTGGGGCACCTATCATGCCTATGCATGCTAATTACTCTAGACTTCCTCCACCTCCTCCTCCACCGTCTGATCCAATCAATAATTATGGTTATCATAATGATCATGAGGAATATGAAGGTGGATATTGCTCCATTATGTGA 1710 0.4158 MRIVGLTGGIASGKSTVSNLFKSHDIPVVDADVVAREALKKDSGGWKKVVAAFGEEILLDNGEVNRPRLGQIVFADPDKRQFLNRLLAPYISSGIFWEVGKLWLKGYKVIVLDVPLLFEAKIDKFTAPIIVVWVDPETQIQRLLARDKSSEEDGRNRVNAQMPLDDKKSKADIVIDNTGSLDDLNEQFQKVLFRVTGPLTWCEFWRSRQGVSIILASLSSGVVLCAKAFNNNRLFKSIAKPIHTNLNKLSPSLNFHSTKLRTNQTSFQMAAPKPPHDHHHHPQLPPASETLKYQTWVLKVLIHCDGCTKRIKKILQGIEGVYTTEVDSMQHKVTVTGNVEAETLIKKLSRSGKSVELWPQKPPEKKDKKPSTKSKEEIKEGEKNSTEPVGESSHEDCIDDVGDDGGEEDSNHNDDDDGGGGGDNKSEGGAKKKKKKKKKNKSGSVTSVPLNNNDGGEKVILSTEKVATPKEIIVPPVLEQHHGYNNPYPPHMYYSHPPLAHAPPPYGLSYNTSYPVSTTSAYYVGAPIMPMHANYSRLPPPPPPPSDPINNYGYHNDHEEYEGGYCSIM* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0535 569 Hamap Dephospho-CoA kinase [coaE]. 1 198 IPR001977 GO:0004140|GO:0005524|GO:0015937
Psa3g0535 569 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 286 569 - -
Psa3g0535 569 ProSiteProfiles Heavy-metal-associated domain profile. 302 357 IPR006121 GO:0046872
Psa3g0535 569 MobiDBLite consensus disorder prediction 359 396 - -
Psa3g0535 569 MobiDBLite consensus disorder prediction 415 429 - -
Psa3g0535 569 SUPERFAMILY HMA, heavy metal-associated domain 293 359 IPR036163 GO:0046872
Psa3g0535 569 CDD HMA 302 356 IPR006121 GO:0046872
Psa3g0535 569 Gene3D - 1 197 IPR027417 -
Psa3g0535 569 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 286 569 - -
Psa3g0535 569 Gene3D - 291 357 - -
Psa3g0535 569 Pfam Heavy-metal-associated domain 302 353 IPR006121 GO:0046872
Psa3g0535 569 Pfam Dephospho-CoA kinase 3 182 IPR001977 GO:0004140|GO:0005524|GO:0015937
Psa3g0535 569 CDD DPCK 3 183 - -
Psa3g0535 569 TIGRFAM TIGR00152: dephospho-CoA kinase 3 190 IPR001977 GO:0004140|GO:0005524|GO:0015937
Psa3g0535 569 ProSiteProfiles Dephospho-CoA kinase (DPCK) domain profile. 3 206 IPR001977 GO:0004140|GO:0005524|GO:0015937
Psa3g0535 569 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 191 IPR027417 -
Psa3g0535 569 MobiDBLite consensus disorder prediction 350 451 - -
Psa3g0535 569 MobiDBLite consensus disorder prediction 397 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0535 Psa-Chr3 49218591 49222203 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0535 K00859 - gmx:100791096 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0535 3 49218591 49222203 Psa3g0535 3 49218591 49222203 ECH