Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0504 ATGTCTACGCACCCTAAGTTTACTCGAGTTCCCAGTATCAGAGACAGAGTTCAAGATACTCTCTCTGCTCATCGTAACGAACTCATTTCTCTTCTCTCCAGATATGTTGCTCAGGGGAAAGGGATTTTGCAACCGCATAATTTGATTGATGAACTTGATAATATACTTGGCGAGGATCATGCAACACTGGATCTTAAAAATGGTCCATTTGGCCAAATTATCAACTCTGCACAGGAAGCCATAGTTTTGCCTCCTTTTGTGGCAATAGCAGTTCGTCCCAGACCAGGTGTTTGGGAGTATGTCCGTGTTAATGTCTTTGAACTCAGTGTGGAGCAGTTGAGTGTTTCTGAATATCTCAGCTTCAAAGAAGAACTTGTAGAAGGAAAGAGTAATGATAACATTATATTGGAGCTTGACCTTGAGCCATTTAATGCATCATTTCCCCGTCCAACTCGCTCGTCTTCCATTGGCAACGGTGTGCAGTTTCTCAACCGCCACCTCTCGTCAAATATGTTCCGTAACAAAGATTGCTTGGAACCCTTGCTTGATTTCCTCCGTGTTCACACATATAAAGGCCATGCACTGATGTTAAATGATAGAATACAAAGCATTTCCAAACTTCAGTCTGCTTTGGTCAAGGCTGAGGATCATCTTTCTAAGCTTGCGCCTGATACACTCTATTCTGAGTTTGAATATGAATTACAAGGAACGGGGTTCGAGAGAGGTTGGGGTGATACTGCTGCTCGGGTTTTAGAGATGATGCATCTTCTATTGGATATTCTTCAGGCTCCTGATCCTTCTACACTAGAGACTTTTCTTGGAAGAGTGCCTATGGTGTTCAATGTTGTTATATTGTCTCCACATGGCTTCTTTGGGCAAGCAAATGTCCTCGGCTTGCCTGACACTGGTGGCCAGGTTGTTTATATACTAGATCAAGTGCGGGCCCTTGAGAGTGAGATGCTAGTTCGGATCAAGAAACAAGGACTTGATTTCACTCCTAGAATTCTAATTGTTACTAGGTTAATACCTGATGCAAAGGGGACAACATGCAACCAGCGACTCGAAAGAGTCAGTGGCACTGAATACACACATATTTTGCGTGTTCCATTCCGATCAGAAAAAGGAATTCTTCGTAAATGGATCTCAAGGTTTGATGTCTGGCCTTTCCTGGAAACTTTTGCAGAGGATGTTGCCAGTGAAATTGCTGCCGAGTTACAATGTTATCCCGATTTCATCATAGGAAACTACAGTGATGGGAATCTCGTTGCATCTTTATTGGCTTACAAAATGGGAGTTACCCAGTGCACAATCGCGCATGCATTGGAGAAGACAAAGTATCCAGATTCAGATATATATTGGAAGAAATTCGAAGATAAATACCATTTTTCTTGTCAGTTCACTGCTGATCTAATAGCCATGAACAATGCTGATTTTATCATCACCAGTACATACCAAGAGATTGCTGGAACGAAGAATACTATGCCAGTATGA 1491 0.4219 MSTHPKFTRVPSIRDRVQDTLSAHRNELISLLSRYVAQGKGILQPHNLIDELDNILGEDHATLDLKNGPFGQIINSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVFELSVEQLSVSEYLSFKEELVEGKSNDNIILELDLEPFNASFPRPTRSSSIGNGVQFLNRHLSSNMFRNKDCLEPLLDFLRVHTYKGHALMLNDRIQSISKLQSALVKAEDHLSKLAPDTLYSEFEYELQGTGFERGWGDTAARVLEMMHLLLDILQAPDPSTLETFLGRVPMVFNVVILSPHGFFGQANVLGLPDTGGQVVYILDQVRALESEMLVRIKKQGLDFTPRILIVTRLIPDAKGTTCNQRLERVSGTEYTHILRVPFRSEKGILRKWISRFDVWPFLETFAEDVASEIAAELQCYPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFEDKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTMPV* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0504 496 Gene3D - 149 278 - -
Psa3g0504 496 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 298 488 - -
Psa3g0504 496 PANTHER SUCROSE SYNTHASE 1 494 - -
Psa3g0504 496 Gene3D - 12 148 - -
Psa3g0504 496 PANTHER - 1 494 IPR012820 GO:0005985|GO:0016157
Psa3g0504 496 Pfam Sucrose synthase 9 494 IPR000368 GO:0005985|GO:0016157
Psa3g0504 496 Gene3D Glycogen Phosphorylase B; 283 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0504 Psa-Chr3 47952851 47957139 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0504 3 494 Glycosyltransferase AT4G02280 82.927 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0504 K00695 - gmx:100802045 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0504 3 47952851 47957139 Psa3g0504 3 47952851 47957139 ECH