Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0474 ATGGATACGTATTTACAAACTCGAATTTCTGGGATACTTCCATTTATCACTGCATTTACTGCAACTACAACTTCACGCGCCAACGATCACGCGTCTCAATCTCACCTCACCACGGCAAGGCGGTCAAACAACTCCTCCATGCTTTCCGGGCTCTCCTTTCGGTTTCCAAAATCTCTGAACTCTCGACTCATCGGGAATTCCGCCGGAAACAACGGTCTCGGCGTCGATGATGCGGTTACGGCGGAGAATGTGGTTGTTGCAGAGACAGAAGGAGAAGGGGAAAATGCGAACGGGATTTTCAAGGTTTTTGAACTCAATTCTGTTTGGAGAGGGGGACAAGAGAGTGACGATAATGACGAAGAAGAGTGTGATATTTGTAGTGTTGATGAAAATGAAGATGAAGAAGAGGTTTGGTTTGATAGAGAGTCGTTTTCGAGAATGCTTCGTAGGGTAACCCTAGTTGAGGCAAGAATGTATGCGCACATGTGTCACTTGGGGAATTTGGCATACTCTATTCCCGATATCAAGTCGGGGAACCTCTTGAAGACATGTGGTCTGCGTTTTGTAACTTCATCAATAGAGAAAAGGGAACTGGCTGCAACAGCTGATAAAAATCTGGCATCTGCTGCAATTCAGAAAGAAGAGACCATTGAAAAAGACGCCGGAGAAAAAAATGACGAAGAGAATGATGAGTCGATGATAAATGCATCTGCTGCTTGTCAGATTTCAGTGGTTGAAGGGTCACTTAAAGCAAGCAGCGGGAGCGTTGATACTCTGAACATGATAAACACAAATGCTGGTTCTTTGATGGCAACCACTGATTCAATGACAGCAGTTATTGTTGCAGATGAGGATGTAAAACAAGCTTTTGCCAATGATTTGAATTCAACAAGTTCTACACCATGTGAATGGTACATATGTGACGATGACCAGAGTTCTACAAGATATTTTGTTATTCAGGGCTCAGAATCATTTGAGTCCTGGCAGGCAAACCTACTTTTTGAGCCAGTTCAATTTGAGGGATTTGATGTCCCTGTCCATAGGGGTATATATGAGGCTGCAAAAGTGACATATCAGCAGATGTTACCTGAGGTTCATGCCAACCTAAAATCTCAAGGCTCTCGCGCAACTTTCCGTTTCACTGGCCATTCTCTTGGGGGAAGCTTGGCATTGCTTGTAAATCTTATGCTGTTGATAAGGAAGGAAGTGCCAATTTCTTCTTTGCTTCCTGTGGTAACGTTTGGTTCCCCATCCATCATGTGTGGAGGTGATCGTCTGCTCGAAAAGCTAGGATTACCGCGGAGTCATGTTCAAGCAGTTGCAATGCACAGAGACATAGTACCGCGAGCATTTTCTTGCAAGTACCCTAACCATGTTACAGAACTACTAAAGGCCATTAATGCGAGCTTCCGTTGTCATCCTTGTCTTAATAACCAAAAGCTACTTTATGCACCAATGGGTGAACTATTGATTCTACAGCCAGACGAGAAATTTTCACCGAGCCATGATCTCCTGCCATCAGGTAGTGGTCTATACCTTTTGAGTGGCCCTTTTTCAGAATCCAGTGACACAGAAAACCAGATCCAAGCAGCTCAATTCTTCTTCTTAAACTCCCCGCATCCACTCGAGATATTAAGTGAGCGATCCGCCTATGGTTTTGGAGGAACCATACAAAGGGATCATGACATGAATTCATACCTGAAATCCATTAGAACCGTGATTCGTCAAGAACTTAGCCAAATCCGCACAGCAGCAAGGAGAGGGCTTAGTCAAAAGGTGCAGTGGCCTCTCGTGGTACGACGTGTAAGCGATGCAGACATTGTTGGTGGGAGGTCTATGGTAAGGGTCCGTATAATTCAAGACCAGCCTCCCTTTTCAGGTATTATACAGACACGTAGAGAGTCCTTGAAAAGGTTCAGCAGGCTTGTTGCATCCCAACATATGCAACTATTTGTAATGTTCTTATTTCCGGCACGGTTGTTACTCTCGGAAACATGTAACTTGACTAGCTTAAGTTAA 2019 0.4428 MDTYLQTRISGILPFITAFTATTTSRANDHASQSHLTTARRSNNSSMLSGLSFRFPKSLNSRLIGNSAGNNGLGVDDAVTAENVVVAETEGEGENANGIFKVFELNSVWRGGQESDDNDEEECDICSVDENEDEEEVWFDRESFSRMLRRVTLVEARMYAHMCHLGNLAYSIPDIKSGNLLKTCGLRFVTSSIEKRELAATADKNLASAAIQKEETIEKDAGEKNDEENDESMINASAACQISVVEGSLKASSGSVDTLNMINTNAGSLMATTDSMTAVIVADEDVKQAFANDLNSTSSTPCEWYICDDDQSSTRYFVIQGSESFESWQANLLFEPVQFEGFDVPVHRGIYEAAKVTYQQMLPEVHANLKSQGSRATFRFTGHSLGGSLALLVNLMLLIRKEVPISSLLPVVTFGSPSIMCGGDRLLEKLGLPRSHVQAVAMHRDIVPRAFSCKYPNHVTELLKAINASFRCHPCLNNQKLLYAPMGELLILQPDEKFSPSHDLLPSGSGLYLLSGPFSESSDTENQIQAAQFFFLNSPHPLEILSERSAYGFGGTIQRDHDMNSYLKSIRTVIRQELSQIRTAARRGLSQKVQWPLVVRRVSDADIVGGRSMVRVRIIQDQPPFSGIIQTRRESLKRFSRLVASQHMQLFVMFLFPARLLLSETCNLTSLS* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0474 672 Pfam Lipase (class 3) 317 453 IPR002921 GO:0006629
Psa3g0474 672 SUPERFAMILY alpha/beta-Hydrolases 298 483 IPR029058 -
Psa3g0474 672 CDD Lipase_3 278 449 - -
Psa3g0474 672 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 24 245 - -
Psa3g0474 672 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 252 667 - -
Psa3g0474 672 Gene3D alpha/beta hydrolase 262 481 IPR029058 -
Psa3g0474 672 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 252 667 IPR043367 GO:0008970
Psa3g0474 672 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 24 245 IPR043367 GO:0008970
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0474 Psa-Chr3 44792820 44796403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0474 1 671 Acyl Lipid Metabolism Gene Families AT1G02660 49.452 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0474 - - gmx:100788786 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0474 3 44792820 44796403 Psa3g0474 3 44792820 44796403 ECH
Psa3g0474 3 44792820 44796403 Psa6g3726 6 324615530 324618904 PCT