Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0445 ATGGCGACTCTAACTCCAATTTGTTCCATAACAACGAAACTGAGTAACCAACAAAAACAACACAATCACCACTCCAATAATCTCAATTTCACAAATCGAAATCATAACTCAAGAAATTCAAACAAAGTAATCCGATTAGCCTCCGCCGCCAACCAGAGCCAATCTTCCCCGGGATTATACTCCGCCAAGATCTTCGACCTCACCGCTTCAAACGTCGACCTCGTTCTAGAAGACGTTCGCCCTTACCTCATCTCCGACGGAGGAAACGTCGATGTCGTATCCGTTGAAAACGGCGTCGTTTCTCTTAAGCTACAAGGAGCTTGCGAAAGCTGTCCTAGCTCAACCACAACGATGAAGATGGGAATCGAACGCGTTCTCAAGGAAAAATTCGGAGATTCCATTAAAGATATCGTTCAGGTTTTCGATGATGATCAATCAAAGGAAACAACCGTTGAGGCGGTGAATAATCATCTAGAGATATTGAGACCGGCGATAAAGAATTACGGCGGTAGTGTGGAGGTGTTATCGGTGGAAGGTGGTGATTGTGTTGTGGAGTATGTTGGACCTGAGTCCATTGGTTCAGGAGTTAAAGCTGCAATCAAAGAGAAGTTTCCAGATATTCTCAATGTTACATTCTCCACCTAG 645 0.4434 MATLTPICSITTKLSNQQKQHNHHSNNLNFTNRNHNSRNSNKVIRLASAANQSQSSPGLYSAKIFDLTASNVDLVLEDVRPYLISDGGNVDVVSVENGVVSLKLQGACESCPSSTTTMKMGIERVLKEKFGDSIKDIVQVFDDDQSKETTVEAVNNHLEILRPAIKNYGGSVEVLSVEGGDCVVEYVGPESIGSGVKAAIKEKFPDILNVTFST* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0445 214 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 12 213 - -
Psa3g0445 214 MobiDBLite consensus disorder prediction 14 35 - -
Psa3g0445 214 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 146 211 IPR034904 -
Psa3g0445 214 Gene3D - 150 212 IPR034904 -
Psa3g0445 214 PANTHER NIFU-LIKE PROTEIN 1, CHLOROPLASTIC 12 213 - -
Psa3g0445 214 Gene3D - 64 149 IPR034904 -
Psa3g0445 214 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 70 142 IPR034904 -
Psa3g0445 214 Pfam NifU-like domain 73 133 IPR001075 GO:0005506|GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0445 Psa-Chr3 42300569 42301631 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0445 K22074 - gmx:100527356 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0445 3 42300569 42301631 Psa3g0445 3 42300569 42301631 ECH