Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0415 ATGATGCAAAAAAGGTTGGAAGGTAAGGTGGCGATAATAACCGGTGCAGCGAGTGGAATAGGCGAAGAGACGGTGAAATTATTCGTCGAAAATGGAGCATTTGTTATTGCAGCAGATATTCAAGATGAATTAGGTCATAAAGTTGCAGATTCAATAGGTTCAGAAAAAGTAACATATCATCATTGTGACGTGAGAGACGAAAAACACGTTGAAGAAACGGTTAACTTTGCGTTGGAAAAGCACGGTCGCGTTGATGTTTTGTTTAGTAATGCAGGAATAATAGGCTCTTTATCAGGAATACTCGAGCTCGATCTGGGCGAGTTTGAGAAAACTATGGCTACAAATGTTGTTGGAACAGCAGCTATGATCAAGCACGCGGCGCGTGCCATGGTTGAGAAAAAGATACGCGGTTCGATCATATGTACTACTAGTGTTTCTGCTTCTGTTGGTGGAACAGGTCCTAATGGTTATACTACATCAAAACATGCTGTTTTAGGACTTGTGAAATCTGCTTGTAGTGAACTTGGGGGTTATGGAATTAGGGTTAATAGTATTTCTCCTTATGGAATTGCGACGCCGCTTTCGTGTCGAGCTTACAATCTTGAACCTCATGAAGTTGAAGCTAGTACATATTGCAATGCTAATTTGAAGGGTGTTGTGTTGAAGGCTAAGCATATTGCAGAAGCAGCTTTGTTTCTTGCTTCTGATGAAGCTGTTTATATCAGTGGCCATAACCTGGTTGTTGATGGTGGCATATCGGTTGTTCGTAATACTACTACGTTAGAGCATGTTTGA 795 0.4113 MMQKRLEGKVAIITGAASGIGEETVKLFVENGAFVIAADIQDELGHKVADSIGSEKVTYHHCDVRDEKHVEETVNFALEKHGRVDVLFSNAGIIGSLSGILELDLGEFEKTMATNVVGTAAMIKHAARAMVEKKIRGSIICTTSVSASVGGTGPNGYTTSKHAVLGLVKSACSELGGYGIRVNSISPYGIATPLSCRAYNLEPHEVEASTYCNANLKGVVLKAKHIAEAALFLASDEAVYISGHNLVVDGGISVVRNTTTLEHV* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0415 264 Pfam Enoyl-(Acyl carrier protein) reductase 15 253 - -
Psa3g0415 264 Gene3D - 1 259 - -
Psa3g0415 264 PRINTS Glucose/ribitol dehydrogenase family signature 10 27 IPR002347 -
Psa3g0415 264 PRINTS Glucose/ribitol dehydrogenase family signature 82 93 IPR002347 -
Psa3g0415 264 PRINTS Glucose/ribitol dehydrogenase family signature 131 147 IPR002347 -
Psa3g0415 264 PRINTS Glucose/ribitol dehydrogenase family signature 157 176 IPR002347 -
Psa3g0415 264 PRINTS Glucose/ribitol dehydrogenase family signature 178 195 IPR002347 -
Psa3g0415 264 PRINTS Glucose/ribitol dehydrogenase family signature 216 236 IPR002347 -
Psa3g0415 264 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 255 IPR036291 -
Psa3g0415 264 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 1 259 - -
Psa3g0415 264 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 IPR002347 -
Psa3g0415 264 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 IPR002347 -
Psa3g0415 264 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 IPR002347 -
Psa3g0415 264 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 3B 1 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0415 Psa-Chr3 39790265 39791764 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0415 6 251 Acyl Lipid Metabolism Gene Families AT3G55290 30.502 2.05e-21 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0415 - - cam:101510572 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0415 3 39790265 39791764 Psa3g0415 3 39790265 39791764 ECH