Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0402 ATGAGATTTCATGCTAGATTTTTCAATTTCCGTCATCTTCTTCAGTTCCGGAACCAATTCCAATCAAAATCCGAACTCACACTTCCAAATTTCCGGCTTCGTCCTTACTCTTCCGAAGTGCAACCTGAAATTTCGCTGGATCTGTTAAACATAATGGAACAAAGATTCTCAGCTATTAAGTATAGGGCTAATTGCCTTGATAATCTCATAAATCAGCCAGAAGTGTCACCATCAGAGTATGCAAGAGCTAACAAGGAGCTTCGAAAGCTCAGTGGTTCTGTGGAACTTATTAATCAATTGAAGGCTAAACAGAAGGAAATTGATGGATTGAAGTCACTAATGACTGAATGTTCTGAAGACAAAGACATGCTTAATATGGCAACAGAGGAAATGGGCCAAGCCATAGAGGAAGAAAGAAAACTGCAGAATATGCTGCTGAAGTCATTACTTCCTAAAGATGATGCTGATGAAAGAGATTGCATTTTGGAGGTACGAGCAGGGAGTGGTGGGGAGGAGGCTTCCTTGTTTGCCATGAACATCCTTAAGATGTACGAGAAGTATGCTCACAATAAAGGCTGGAAGTTTGAAGTGGTAGATATAGCTCAATCTGATATGAAGGGATTCAAGGAGGCCAGTGCAGCAATTGTAGGAGTTGGCGTTTTTGGGAAACTAAAATTTGAGAGTGGAATTCATAGAGTACAGCGTGTTCCTGTCACTGAAAAATTGGGACGTGTTCATACCAGTGCTGTTTCTGTTGCAATTCTCCCTCAGGCTGATGAGGTCGATGTTCAGCTAAAAAATGAAGACTTAAAAATTGATACCTATAGATCTGGTGGTTCGGGTGGTCAGCATGCAAATACAACTAACAGTGCTGTTAGAATAACTCACCTTCCATCTGGGATTGTGGTTGCTATACAAGATGAGCGTTCTCAGCATATGAATAAGGCCAAAGCTCTCAAGGTACTGTGTGCAAAGCTATATGAAATGGAAAGGATCAGACTTCATAGTAGTCGATCAAAGCTCCGATCAGAGCAGATTGGTAGTGGGGACAGATCTGAACGCATCCGAACATACAATTTTCCTCAAGGCCGTGTAACTGATCATAGAGTTGGCATCACTTATCACAACATAGAAGATGTGATGCTAGGAGAGAGTCTTGATGTCTTTATTGATGCTCTCCTTCTGAAAGAAGAAATGGATGCAATTGCAACTTTTAGTTCTTCTACTTAG 1230 0.4106 MRFHARFFNFRHLLQFRNQFQSKSELTLPNFRLRPYSSEVQPEISLDLLNIMEQRFSAIKYRANCLDNLINQPEVSPSEYARANKELRKLSGSVELINQLKAKQKEIDGLKSLMTECSEDKDMLNMATEEMGQAIEEERKLQNMLLKSLLPKDDADERDCILEVRAGSGGEEASLFAMNILKMYEKYAHNKGWKFEVVDIAQSDMKGFKEASAAIVGVGVFGKLKFESGIHRVQRVPVTEKLGRVHTSAVSVAILPQADEVDVQLKNEDLKIDTYRSGGSGGQHANTTNSAVRITHLPSGIVVAIQDERSQHMNKAKALKVLCAKLYEMERIRLHSSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITYHNIEDVMLGESLDVFIDALLLKEEMDAIATFSSST* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0402 409 PANTHER LD18447P 35 407 - -
Psa3g0402 409 Gene3D - 162 390 - -
Psa3g0402 409 SMART PCRF_a_2 112 227 IPR005139 GO:0006415
Psa3g0402 409 Coils Coil 124 144 - -
Psa3g0402 409 Gene3D - 258 353 - -
Psa3g0402 409 Gene3D - 47 154 - -
Psa3g0402 409 PANTHER LD18447P 35 407 - -
Psa3g0402 409 Pfam RF-1 domain 259 369 IPR000352 GO:0003747|GO:0006415
Psa3g0402 409 TIGRFAM prfA: peptide chain release factor 1 54 406 IPR004373 GO:0006415|GO:0016149
Psa3g0402 409 SUPERFAMILY Release factor 72 396 IPR045853 -
Psa3g0402 409 Pfam PCRF domain 61 252 IPR005139 GO:0006415
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0402 Psa-Chr3 37755712 37758920 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0402 K02835 - gmx:100800412 667.151