Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0382 ATGTCATTTTCCTTTCTCTCCCTCTTATTGTTTTCTTCAACTCTCTTTCTCTTTCTGAGAGTTGAATCATGGTACTCCCCTACAATCTCATCTCTAATAAGTAAAAACCTTTTTGATTCAATTTTCCTACACAAGGATGACACTGCATGTCCTGCAAAAAGCTTCTACCCTTACCAATCCTTCATTGAAGCTTCCAAATCTTTTCCACAATTCGGTACTACTGGTTGTTTAGCCACAAGAAAACGTGAGATAGCTGCTTTTCTTGCACAGATTTCTCATGAAACTACTGGTGGATGGTCCACTGCACCTGATGGCCCATTCTCTTGGGGATTATGCTTCAAAGAAGAAATTAGTCCTCAGAGTATTTACTGTGATTCTACTGATAAAGATTGGCCTTGTTTTGAAGGCAAAAGCTATAAAGGAAGAGGTCCCATACAACTTTCTTGGAATTTCAACTATGGACCAGCAGGGAAAGCATTGGGATTTGGATGGGCTGAGAAATCCAGAAATTGTATCAAACAATTCAGTGATTGCATTCAAAACTGCTCTATGGTTTTGGATGACAGAAAGAAACCAAACACCTTCATGCCACAATGTCATGGTTGGAAAATATGTAGGCAACAGAAGCTTGACATAGCTGCTATAAGAACAGCTGGTTATGGTTTGGTCACAAACATAATCAATGGTGGATTGGAATGTGGAATTCCTGGTGATGCAAGAGTCAACGATCGAATTGGATTTTTTCAAAGATATTCTAAGTTGTTTAATGTAGATGTTGGACCTAACTTGGATTGTGCATATCAGAAATCCTTATAA 816 0.3848 MSFSFLSLLLFSSTLFLFLRVESWYSPTISSLISKNLFDSIFLHKDDTACPAKSFYPYQSFIEASKSFPQFGTTGCLATRKREIAAFLAQISHETTGGWSTAPDGPFSWGLCFKEEISPQSIYCDSTDKDWPCFEGKSYKGRGPIQLSWNFNYGPAGKALGFGWAEKSRNCIKQFSDCIQNCSMVLDDRKKPNTFMPQCHGWKICRQQKLDIAAIRTAGYGLVTNIINGGLECGIPGDARVNDRIGFFQRYSKLFNVDVGPNLDCAYQKSL* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0382 271 Gene3D Endochitinase, domain 2 115 173 - -
Psa3g0382 271 SUPERFAMILY Lysozyme-like 29 270 IPR023346 -
Psa3g0382 271 PANTHER CHITINASE-RELATED 26 270 - -
Psa3g0382 271 PANTHER OS05G0138200 PROTEIN 26 270 - -
Psa3g0382 271 PIRSF Endochitinase 20 271 IPR016283 GO:0004568|GO:0005975
Psa3g0382 271 Pfam Chitinase class I 32 265 IPR000726 GO:0004568|GO:0006032|GO:0016998
Psa3g0382 271 Gene3D - 32 266 - -
Psa3g0382 271 CDD chitinase_GH19 33 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0382 Psa-Chr3 36137959 36139925 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0382 20 269 Glycoside Hydrolase AT4G01700 58.333 4.78e-111 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0382 - - gmx:100784196 368.237