Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0367 ATGTTGAGGATAGTGAAGGAACCAGAGGAAGTGATGAGAATGCGAGGAGGTTCTGTGCTTGGAAAGAAGACGATTCTGAAGAGCGACCATTTTCCTGGTTGCCAGAATAAGCTTCTCACTCCGCAGATCGAAGGTGCTCCGAATTATCGACAGGCTGAGTCTTTGCATGTTCATGGTGTTGCAATACCGACCGTTGATGGAATCCGAAATGTTCTTAATCACATTGGTGCTCGCCGGAAAAGACAGCAAGTTCTTTGGATTAGTCTTCGCGAAGAACCGCTTGTGTACATTAATGGCAGACCTTTTGTGTTGCGAGATGTGGAGAGACCATTCTCCAACCTTGAGTATACGGGAATTAATAGGGATAGGGTGGAACAAATGGAAGCTCGTTTGAAAGAAGACATCATGTTGGAAGCTAGAAGGTATGGTAATAAGATCCTTGTGACGGATGAGCTGCCTGATGGTCAGATGGTGGACCAATGGGAACCCGTGTCACGTGATTCTGTCGAGACGCCGTTGGAGGTGTATGAGGAATTGCAAAAGGAGGGATACCTTGTTGATTATGAACGTGTTCCTGTAACGGATGAAAAATCGCCTAAGGAACTGGATTTTGATATTTTGGTACATAAAATCTCTCAAGCTAATGTCAATACAGAAATAATTTTTAATTGTCAAATGGGGCGTGGACGAACGACAACTGGAATGGTCATCGCAACTCTGATGTACCTCAATCGAATTGGGGCCTCTGGGATTCCAAGAAGCAATTCGATTGGTAGAATTTTTCAATCTATGACCAATGTTGCTGACCATTTGCCAAGCTCAGAGGAGGCAATTTGCAGGGGAGAATATGCGGTTATAAGAAGCTTAATTCGGGTGTTAGAGGGTGGTGTTGACGGGAAAAGACAAGTGGACAAAGTCATTGACAAATGTGCTTCAATGCAGAATCTGCGTGAAGCAATTGGCACCTATCGCAATAGCATTCTACGACAGCCAGATGAGATGAAAAGGGAGGCATCACTTTCCTTTTTTGTGGAGTACTTGGAGAGATACTACTTTTTAATATGTTTTGCTGTGTACCTTCATTCAGAAAGGGATATACTCCACTCTAGTACTGCTGGTCAAAGTAGTTTTTCTGATTGGATGAGAGCTAGGCCTGAACTCTACAGCATTATTCGCAGGTTACTCAGGAGAGATCCAATGGGTGCACTTGGATATTCAAGTTCGAAACCATTTTTAAAGAAGATAGATGAATCAACTGATGTCCGGCCTTCTGAGATGGGTATGGTTGCTGCCTTGAGAAAGGGTGAGGTTCTTGGTAGTCAAACTGTTCTTAAAAGTGATCACTGTCCTGGATGCCAAAATCCAAGTTTGCCAGAGAGAGTAGACGGTGCTCCTAATTTCCGACAAATTCCTGGATTTCCAGTTTTTGGTGTTGCGAATCCAACTGTTGATGGTATCCGATCAGTCATTCAAAGAATTGGCAGCACTAATGGTGGACACCCAATACTTTGGCACAACATGAGAGAAGAGCCTGTGATTTACATCAATGGGAAGCCATTTGTTCTTCGTGAAGTTGAAAGACCATACAAAAACATGTTAGAGTACACGGGTATTGGCCGTGAAAGAGTTGAGAAAATGGAAGCACGGTTAAAAGTAGACATTTTAAGGGAAGCTAAACAATATAGCAATGCCATAATGGTTATTCATGAAACAGATGATGGACATATATTTGATGCTTGGGAGCATGTTACCTCTGACGTGATTCAAACCCCACTTGAAGTTTTCAAAAGCCTGGAAGCTGATGGGTTTCCCATTAAGTATGCACGTGTACCCATCACTGACGGAAAAGCTCCTAAACGTTCTGACTTTGATACTTTGGCAATTAATATTGCTTCTGCTGCAAAGGACACTTCTTTTGTTTTCAATTGTCAGATGGGCCGGGGAAGGACTACTACTGGTACTGTCATAGCCTGCCTTGTGAAACTTCGCATTGATATTGGTAGGCCCATTAAAATATTGAGTGATGATATGACCCAAGAACAATCAAATAGCGGTTCTTCAAGCGGAGATGAAGCTGGGGGATGTGTCACTGCATTGACCTCCAATACTTCACAAATGAAGATGGACGGGAAACAAAACCGTGTTTTTGGTATAAACGACATTCTCTTGTTATGGAAGATAACCACATTATTTGATAATGGTGTTGAATGCCGAGAGGCCTTAGATGCTGTTATTGATAGATGTTCTGCACTCCAAAACATTCGTCAAGCTGTTCTACAATATAGAAAAGTATTTAATCAACAGCATGTTGAACCTAGGGTAAGGAGGGTGGCTTTAAATCGCAGCGCTGAGTACTTGGAACGGTATTTCCGTCTAATTGCTTTTGCAGCATATCTTGGAAGCGAAGCATTCGATGGGTTTTGTGGACAAGGAGATTCCAAAATGACATTTAAGGTTTGGTTGCGTCAGAGGCCAGAGGTACAGGCTATGAAATGGAGCATCAGATTAAGACCCGGGAGATTTTTCACTGTCCCTGAGGAGTTGAGAGAATCACAAGAGTCTCAGCATGGAGATGCAGTGATGGAGGCTACTGTCAAAACAAGAAATGGTTCTGTTTTGGGGAAGGGCTCCATACTTAAAATGTATTTCTTTCCTGGACAGAGAACTTCCAATCATATACAAATACGTGGTGCACCTCATGTTTATAAGGTTGATGAATACCCTGTGTATTGCATGGCAACTCCAACCATCTCTGGGGCCAAGGAGATGCTAAACTACTTGGATGCTAAGTCTAAACCTGGTTTCACTGCTCAAAAAGTTATATTGACCGATGTAAGAGAAGAAGCGATTGTTTATATCAACTGTGTTCCCTTTGTTCTTAGGGAGTTAAACAAACATGTTGATACACTAAAACATGTCGGAATCACCGGTCCTGCGGTTGAACACATGGAGGCACGGATGAAAGAAGACATATTGGCTGAGATTAAAGAGTCTGGTGGGCGAATGCTACTACACCGTGAAGAATATGACCCCTCAACAAACCAGTCTTCTGTGGTTGGATACTGGGAAAATATTCTGGCAGATGATGTGAAGACACCAGCAGAAGTTTATTCTTTTCTAAAAGATGATGGATATGATATTGTCTATCGGAGGATACCCTTAACAAGAGAGAGAGATGCCCTGGCCTCCGACGTCGATGCAATACAGTACTGTCAAGATGACTCTGCAGGGAATTACCTCTTTGTATCACACACAGGCTTTGGTGGAGTCGCATATGCAATGGCCATCATTTGTATTAGACTTGGTGCAGATGCAAACTTTACATCAGAAGTCCTGCGGTCATCATTTGGTCCTGATACATCTGCAGTGACTGAAGAGAATTTGCATTCTCGAGCTTCTAATGAAACAGCACTCAGGATGGGCGACTATCGTGACATTTTGAACCTTACAAGAGTCCTCGCACATGGCCCCCAAAGCAAAGCAGATGTTGACATTGTCATTGAAAGGTGTGCAGGCGCAGGGCATATACGAGATGATATTCTTTATTACAATAGAGAATTTGAGAAGCTTACTGATGTTGATGACGAGGAGCGTGCATATCTTATGGACATGGGTATCAAGGCTTTGAGGCGATATTTTTTTCTTATCACATTCACATCGTATCTCTACTGCACGTCTCCCGCCGATACAGAATTCGCCGCGTGGATGGATGCCAGACCAGAGCTTGATCATCTATTTTCTCCCCCGATTACTTCTTTTCTCGATGCTGCGTGTAGCAACACTCTTGCTACTTTGCAAACTGCTGTCTCAGGGAGAGCATCATCCTGTAGTCAGCTTCTATCTGTAACTATAGTTTTCTCAGTGTATGGAAATTTTGTAATGATGATGGCGAGTGAGTTGCATGGGATTTCTATGTTATTAAGTTCAAAGAAGCCATTCTTCGACCGTGACAGGATTCTGTCTTCTTCATTCTCTGGTAGCAAGTTGCATTCAAAGAATGCAACATTTGATTTTTCGTATGGAAAATTCGTAAGTGTTGTACAAAGAAAGACGAATAGAAGATTTTTGGCTACTTCTACTCTTGCCGATGTGGCAAACAATTTTATGACCCTACAATCAACAATTTTCGCTGAAGAAGAAGCCAATCCAAAGACTGTTGCATCGATCATTTTAGGTGGTGGAGCAGGAACTCGTCTATTTCCCCTTACTCAAAAAAGGGCTAAACCTGCTGTGCCATTCGGAGGATGTTATAGGCTGGTGGACATACCAATGAGCAATTGTATTAATAGTGGAATTAGCAAAATTTACGTCCTTACACAGTTCAATTCTCAGTCCCTCAACCGCCACATTGCTCGAACGTATAATTTGGGAGGTGGCGTCAACTGTGGCGGTAGTTTTATCGAGGTATTGGCAGCATCGCAAACACTCGGCGAATCAGGGAATAAGTGGTTTCAGGGTACGGCCGATGCTGTAAGACGGTTCCTTTGGTTGTTTGAGGATGCTGAGCATAAAAGCATCGAGAACATTCTGATATTGTGTGGTGATCAGCTCTATCGAATGGATTACATGGAATTAGTGAAGAAGCACATTAATTCATGCGCTGATATATCGGTATCGTGTCTCCCAGTGGATGGCAGTCGTGCCTCTGATTTTGGACTGGTGAAGGTCGACGAAAGAGGACAGATACGCCGATTCATGGAAAAACCCAAGGGAGAGTTTTTAAGATCTATGCATGTAGATACAACTGTTTTTGGATTATCAGCTCAAGAAGCAAGGAAGCTTCCATATATCGCATCAATGGGTATATACGTGTTTAAACTAGACGTTCTTCGCAAACTTCTCAGGAACTGTTATCCTAATGCAAATGATTTCGGATCCGAGGTCCTTCCGAAGGCTCTAAAAGATTTTAAAGTCCAGGCATGTCTTTTCAGTGGTTATTGGGAAGATATTGGGACTATAAAATCTTTCTATGATGCAAACTTGGCGCTTATGGACCAGCCACCAAAGTTTCAGTTATATGATCAGTCAAAGCCTATTTTTACGTGTCCTCGGTTCCTACCCCCAACTAAAATGGAGAAATGTCAGGTGATTAATTCTTTGATTTCAGATGGTTGTTTTTTAAGAGAGTGCATGGTTGAGCATTCCATAGTTGGAATTCGCTCGAGACTCGATTCTGGAGTGCAGCTAAAGGATACCTTGATGATGGGCGCTGACTATTATCAAACAGAGGCTGAAATCGCGTCTCTTTTAGCAGTGGGGGACGTTCCGATAGGCATAGGCAAGAACACGAAAATTATGAATTGTATAATCGACAAAAACGCAAGAATTGGAAACAATGTAATAATTGCAAACAAAGAAAATGTGCAGGAGGCTGATAGATCGTGCGAGGGGTTTTATATTCGATCAGGGATCACGGTGGTGTTAAAAAACTCGGTAATAAACAACGGCACAATGATTTAA 5460 0.4251 MLRIVKEPEEVMRMRGGSVLGKKTILKSDHFPGCQNKLLTPQIEGAPNYRQAESLHVHGVAIPTVDGIRNVLNHIGARRKRQQVLWISLREEPLVYINGRPFVLRDVERPFSNLEYTGINRDRVEQMEARLKEDIMLEARRYGNKILVTDELPDGQMVDQWEPVSRDSVETPLEVYEELQKEGYLVDYERVPVTDEKSPKELDFDILVHKISQANVNTEIIFNCQMGRGRTTTGMVIATLMYLNRIGASGIPRSNSIGRIFQSMTNVADHLPSSEEAICRGEYAVIRSLIRVLEGGVDGKRQVDKVIDKCASMQNLREAIGTYRNSILRQPDEMKREASLSFFVEYLERYYFLICFAVYLHSERDILHSSTAGQSSFSDWMRARPELYSIIRRLLRRDPMGALGYSSSKPFLKKIDESTDVRPSEMGMVAALRKGEVLGSQTVLKSDHCPGCQNPSLPERVDGAPNFRQIPGFPVFGVANPTVDGIRSVIQRIGSTNGGHPILWHNMREEPVIYINGKPFVLREVERPYKNMLEYTGIGRERVEKMEARLKVDILREAKQYSNAIMVIHETDDGHIFDAWEHVTSDVIQTPLEVFKSLEADGFPIKYARVPITDGKAPKRSDFDTLAINIASAAKDTSFVFNCQMGRGRTTTGTVIACLVKLRIDIGRPIKILSDDMTQEQSNSGSSSGDEAGGCVTALTSNTSQMKMDGKQNRVFGINDILLLWKITTLFDNGVECREALDAVIDRCSALQNIRQAVLQYRKVFNQQHVEPRVRRVALNRSAEYLERYFRLIAFAAYLGSEAFDGFCGQGDSKMTFKVWLRQRPEVQAMKWSIRLRPGRFFTVPEELRESQESQHGDAVMEATVKTRNGSVLGKGSILKMYFFPGQRTSNHIQIRGAPHVYKVDEYPVYCMATPTISGAKEMLNYLDAKSKPGFTAQKVILTDVREEAIVYINCVPFVLRELNKHVDTLKHVGITGPAVEHMEARMKEDILAEIKESGGRMLLHREEYDPSTNQSSVVGYWENILADDVKTPAEVYSFLKDDGYDIVYRRIPLTRERDALASDVDAIQYCQDDSAGNYLFVSHTGFGGVAYAMAIICIRLGADANFTSEVLRSSFGPDTSAVTEENLHSRASNETALRMGDYRDILNLTRVLAHGPQSKADVDIVIERCAGAGHIRDDILYYNREFEKLTDVDDEERAYLMDMGIKALRRYFFLITFTSYLYCTSPADTEFAAWMDARPELDHLFSPPITSFLDAACSNTLATLQTAVSGRASSCSQLLSVTIVFSVYGNFVMMMASELHGISMLLSSKKPFFDRDRILSSSFSGSKLHSKNATFDFSYGKFVSVVQRKTNRRFLATSTLADVANNFMTLQSTIFAEEEANPKTVASIILGGGAGTRLFPLTQKRAKPAVPFGGCYRLVDIPMSNCINSGISKIYVLTQFNSQSLNRHIARTYNLGGGVNCGGSFIEVLAASQTLGESGNKWFQGTADAVRRFLWLFEDAEHKSIENILILCGDQLYRMDYMELVKKHINSCADISVSCLPVDGSRASDFGLVKVDERGQIRRFMEKPKGEFLRSMHVDTTVFGLSAQEARKLPYIASMGIYVFKLDVLRKLLRNCYPNANDFGSEVLPKALKDFKVQACLFSGYWEDIGTIKSFYDANLALMDQPPKFQLYDQSKPIFTCPRFLPPTKMEKCQVINSLISDGCFLRECMVEHSIVGIRSRLDSGVQLKDTLMMGADYYQTEAEIASLLAVGDVPIGIGKNTKIMNCIIDKNARIGNNVIIANKENVQEADRSCEGFYIRSGITVVLKNSVINNGTMI* 1820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0367 1819 TIGRFAM glgC: glucose-1-phosphate adenylyltransferase 1387 1783 IPR011831 GO:0005978|GO:0008878
Psa3g0367 1819 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 1392 1411 IPR005836 GO:0005978|GO:0008878
Psa3g0367 1819 CDD PTP_paladin 433 748 - -
Psa3g0367 1819 Pfam Nucleotidyl transferase 1388 1664 IPR005835 GO:0009058|GO:0016779
Psa3g0367 1819 CDD PTP_paladin 15 310 - -
Psa3g0367 1819 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1370 1684 IPR029044 -
Psa3g0367 1819 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 1 338 - -
Psa3g0367 1819 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 603 1245 - -
Psa3g0367 1819 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 343 388 - -
Psa3g0367 1819 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 423 603 - -
Psa3g0367 1819 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1386 1780 IPR029044 -
Psa3g0367 1819 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 431 663 IPR029021 -
Psa3g0367 1819 Pfam Inositol hexakisphosphate 944 1099 - -
Psa3g0367 1819 Pfam Inositol hexakisphosphate 505 661 - -
Psa3g0367 1819 Pfam Inositol hexakisphosphate 87 241 - -
Psa3g0367 1819 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 1598 1608 IPR005836 GO:0005978|GO:0008878
Psa3g0367 1819 PANTHER METAL ION-BINDING PROTEIN 343 388 - -
Psa3g0367 1819 PANTHER METAL ION-BINDING PROTEIN 423 603 - -
Psa3g0367 1819 PANTHER METAL ION-BINDING PROTEIN 1 338 - -
Psa3g0367 1819 PANTHER METAL ION-BINDING PROTEIN 603 1245 - -
Psa3g0367 1819 CDD LbH_G1P_AT_C 1687 1813 - -
Psa3g0367 1819 Gene3D Protein tyrosine phosphatase superfamily 444 689 IPR029021 -
Psa3g0367 1819 Gene3D Protein tyrosine phosphatase superfamily 880 1127 IPR029021 -
Psa3g0367 1819 Gene3D Protein tyrosine phosphatase superfamily 24 283 IPR029021 -
Psa3g0367 1819 CDD ADP_Glucose_PP 1389 1650 - -
Psa3g0367 1819 SMART PTPlike_phytase_2 943 1101 - -
Psa3g0367 1819 SMART PTPlike_phytase_2 505 661 - -
Psa3g0367 1819 SMART PTPlike_phytase_2 87 242 - -
Psa3g0367 1819 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 862 1110 IPR029021 -
Psa3g0367 1819 Gene3D Hexapeptide repeat proteins 1685 1819 - -
Psa3g0367 1819 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 10 246 IPR029021 -
Psa3g0367 1819 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 1483 1491 IPR005836 GO:0005978|GO:0008878
Psa3g0367 1819 SUPERFAMILY Trimeric LpxA-like enzymes 1683 1819 IPR011004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0367 Psa-Chr3 35204974 35217563 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0367 - - gmx:100788460 2182.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0367 3 35204974 35217563 Psa3g0367 3 35204974 35217563 ECH