Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0365 ATGGCTCCAACAATTCTGCCCCTGGCAACTTTATTTTTAGCTTTCTCCGCTTCATTTCTCCGGATCGGAGAAGCGGAAGCAGATCGACTCACTGCACACAAGCTTAATTCTCATATTCTTCAGGAGTCAATCGCTAAAGAGGTTAACGAAAACCCAGGGGCAGGATGGAAGGCTGCTATTAATCCTCGCTTCTCCAATTCTACGGTTGGACAATTTAAGCGCCTTCTTGGAGTCAAACAAACGCCTAGGAATGAACTCAGTAGTATACCTGTCGTAACTCATCCAAAATCATTAAACTTGCCAAAGGAATTTGATGCAAGGACAGCTTGGCCTCAATGTAGCACTATTGGAAGAATTCTAGATCAGGGTCACTGTGGTTCTTGTTGGGCATTTGGCGCTGTTGAATCATTATCAGACCGTTTTTGCATTCATTTTGGCGTGGATGTGCCCCTTTCTGTTAATGACCTTCTTGCATGTTGTGGATTTCTTTGTGGGTCTGGCTGTGATGGTGGGTATCCCATTTCTGCATGGAAATACTTTGCACACCATGGTGTTGTCACTGAAGAGTGTGACCCATACTTTGATCAAATTGGATGTTCTCATCCTGGTTGTGAGCCAGGATATCAAACTCCCAAGTGCGTTAGAAAGTGTGTAAAGGGAAACCAGGTTTGGAAAAAGTCAAAACACTACAGTGTCAAACCATATAAGGTCAACTCTGATCCCCAAAATATCATGGAAGAAGTTTATAAGAACGGGCCGGTTGAAGTTGCATTCAGTGTTTATGAGGATTTTGCTCACTACAAATCAGGAGTTTACAAACACATCACAGGTTCTGCACTAGGCGGTCACGCAGTAAAGCTGATTGGGTGGGGAACAAGTGATGAAGGGGAGGACTATTGGGTATGCTGA 909 0.44 MAPTILPLATLFLAFSASFLRIGEAEADRLTAHKLNSHILQESIAKEVNENPGAGWKAAINPRFSNSTVGQFKRLLGVKQTPRNELSSIPVVTHPKSLNLPKEFDARTAWPQCSTIGRILDQGHCGSCWAFGAVESLSDRFCIHFGVDVPLSVNDLLACCGFLCGSGCDGGYPISAWKYFAHHGVVTEECDPYFDQIGCSHPGCEPGYQTPKCVRKCVKGNQVWKKSKHYSVKPYKVNSDPQNIMEEVYKNGPVEVAFSVYEDFAHYKSGVYKHITGSALGGHAVKLIGWGTSDEGEDYWVC* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0365 302 Pfam Papain family cysteine protease 100 302 IPR000668 GO:0006508|GO:0008234
Psa3g0365 302 PANTHER CATHEPSIN B-LIKE PROTEASE 3 22 301 - -
Psa3g0365 302 CDD Peptidase_C1A_CathepsinB 101 302 - -
Psa3g0365 302 Pfam Peptidase family C1 propeptide 40 82 IPR012599 GO:0004197|GO:0050790
Psa3g0365 302 PRINTS Papain cysteine protease (C1) family signature 122 137 IPR000668 GO:0006508|GO:0008234
Psa3g0365 302 PRINTS Papain cysteine protease (C1) family signature 283 293 IPR000668 GO:0006508|GO:0008234
Psa3g0365 302 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 281 291 IPR025660 -
Psa3g0365 302 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 122 133 IPR000169 -
Psa3g0365 302 SUPERFAMILY Cysteine proteinases 46 302 IPR038765 -
Psa3g0365 302 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 22 301 - -
Psa3g0365 302 SMART pept_c1 100 301 IPR000668 GO:0006508|GO:0008234
Psa3g0365 302 Gene3D Cysteine proteinases 29 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0365 Psa-Chr3 35157385 35162009 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0365 K01363 - gmx:100788988 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0365 3 35157385 35162009 Psa3g0365 3 35157385 35162009 ECH