Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0364 ATGCTGCGGCTAAAAGCGTTTCGTCCCTCTGCCGATAAAATCGTTAAGATCCAATTGCATCCGACGCATCCATGGATGGTAACTGCCGATGATTCAGATCGAGTATCTGTTTGGAACTGGGAGCACCGTCAGGTGATATACGAGTTGAAAGCTGGTGGAGTCGATGAACGACGTTTAGTAGGTGCCAAATTGGAGAAACTGGCTGAGGGAGAAACAGAGTCCAAAGGAAAACCGACAGAAGCCATTCGTGGAGGAAGTGTCAAGCAGGTGAATTTTTATGATGATGATGTACGCTTTTGGCAACTTTGGCATAATCGCTCTGCAGCAGCAGAAGCACCAACAGCTGTCCATACTTCATCTTTTAGTTCTCCCGCCCCATCAACAAAAGGGAGGCATTTTCTTGTCATATGTTGTTTAAACAAAGCAATATTTTTGGACTTGGTGACAATGCGTGGCCGTGATGTACCAAAGCAAGAGCTTGATAACAAGTCCCTACACTGCATGGAGTTCCTTTATAGATCTGGCGTTGGTGATGGTCCTCTTGTGGCTTTTGGTGCATCTGATGGTGTCATTAGAGTTCTCTCAATGATTACATGGAAGCTTGCAAGAAGATACACTGGTGGTCATAAAGGAACAATCTCTTGCTTGAAGTCCTTCATGGCAGCTTCAGGCGAGGCTCTCCTGGTTTCAGGTGCTAGTGACGGATTGCTCATAATTTGGAGTGCTGATCATGGACACGATTCGCGTGAACTTGTACCCAAGCTGAGTTTAAAAGCACATGATGGTGGGGTTGTGGCAGTTGAGCTATCCAGAGTGATGGGAGGTGCTCCTCAGCTAATTACAATTGGTGCAGATAAGACATTAGCTATATGGGACACAATCTCCTTTAAGGAGCTGCGGCGTATAAAGCCAGTTCCAAAATTGGCTTGCCACAGCGTGGCTTCTTGGTGCCACCCTCGAGCTCCAAATCTTGATATTCTAACCTGTGTCAAAGATTCTCACATATGGGCAATTGAACATCCCACATATTCTGCTCTCACTAGGCCATTGTGCGAATTGACAACAGTTATTCCTCCACATGCTCTTGCTCCTAATAAGAAACTGAGGGTGTATTGTATGGTTGCACATACACTGCAGCCACATCTTGTTGCTATTGGAACCAATATTGGTGTTGTTATCTGCGAGTTTGATGCTAGATCTCTTCCACCTGTTGCTCCCCTACTTACCCCACCAGACAGTAGAGAGCATTCGGCTGTATTTGTAATTGAAAGGGAGCTAAAGCTATTAAATTTTCAACTGAACAACTCTGTAAATCCATCCCTTGGAAATAACAGCTCCTTGTCGGAAACAGGAAGACCTCAGGGAGATTCTTTTGAACCATTGACTGTCAAGCAGGGGAAGAAGCACATTAGCACACCTGTTCCTCATGATTCATACTCGGTTCTTTCTGTAAGCAGTTCAGGAAAGTATTTAGCAATCGTATGGCCAGATATTCCTTATTTCTCTGTCTACAAGGTCAGTGATTGGTCAATTGTTGACTCTGGCAGTGCAAGGCTTCTCGCTTGGGATGCTTGTCGTGACAGATTTGCTATATTGGAATCATCATTACCTCCCCGAATTCCTATAATTCCCAAGGGTAGTTCATCAAAAAGAGCAAAAGAAGCTGCTGCAGCACAAGCAGCTGCAGCTGCAGCTGCTGCTGGTTCCTCAGCTTCTGTTCAAGTGCGAATCGTGTTGGATGATGGAACATCAAATATACTAATGAGGTCTGTTGGTGCACGCAATGAACCAGTCATTGGTTTGCATGGAGGGGCACTGCTTGGTGTTGCCTATCGGACATCTAGAAGAATCAGTCCTATTGCTGCTACTGCTATTTCGACAATCCAGTCTATGCCGTTATCAGGTTATGGAAGCAGTGGTCTTTCTTCATTTTCCACTTATGATGATGGATTTTCTTCACATAGATCTCCAGCTGAGGCGGCACCTCAAAACTTCCAGTTATACAGTTGGGAGACATTTCAGCCTGTGGGGGGTCTACTTCCTCAGCCAGAATGGACTGCTTGGGACCAAACCGTCGAGTATTGTGCATTTGCATACCAACAATACATAGTCATATCTTCTTTGCGCCCACAATATCGATACCTGGGAGATGTTTCAATTCCATATGCTACTAGTGCTGTTTGGCATCGGAGGCAACTGTTTGTGGCGACACCAACAACTATAGAAGTTGTTTTTGTGGACGCTGGGGTTACACAAGTCGACATTGAAACTAAGAAGATGAAAGATGAGCAGAAAATGAGAGAAGCACAGACAAGAGCAATATCAGAGCACGGGGAGTTAGCACTAATTACAGTTGAAGGTCCTCAATCTTCTACAGAAGAAAGAATACCATTGAGGCCACCAATGCTGCAGGTGGTTCGACTGGCTTCATTTCAGCATGCTCCTTCAGTGCCACCTTTTCTATCATTACCAAAACAGTCTAGAGTTGATAGTGATGACCCTTGGACAAAAGAAGCAGAGGAGAGAAGGACAAGTGAAGTAGCGGTTGGTGGAGGGGGTGTGTCTGTGGCAGTTACTCGTTTTCCAACGGAGCAGAAACGTCCAGTTGGGCCTCTTGTTGTAGTGGGTGTCAAAGATGGAGTTCTTTGGCTAATTGACAGGTACATGCGAGCTCACGCCTTATCCCTGAGTCATCCCGGTATTCGTTGCCGATGTCTTGCTGCTTATGGTGATGCTGTTAGTGCAGTAAAATGGGCAAGTAGGCTTGGGAGAGAACACCATGATGATTTAGCACAATTTATGCTAGGAATGGGCTATGCTACTGAAGCACTTCATTTACCTGGATTATCAAAGAGGTTGGAGTTTGATTTGGCAATGAAGAGCAATGATTTGAAGAGAGCTCTTCATTGTCTTCTTACCATGAGTAACAGCCGGGATATAGGTCATGATGGTACTGGGCTTGGTTTGAATGACATTCTTAATTTAACAGATAAAAAACAAGATGTAGTTGAAGGTGTTCAGGGCATAGTGAAATTCGCAAAAGAGTTTTTGGAACTTATCGATGCTGCAGATGCTACAGCACAGGGTGAAATTGCCCGTGAAGCTCTGAAGAGGTTAGCTGCCGCTGGATCAGTGAAAGGTGCTTTACAAGGTCATGAGCTGAGGGGATTAGCATTGCGCCTTGCAAATCATGGAGAGTTGACTCGGCTAAGTGGTCTGATAAACAACCTAATCACGCTTGGCTTGGGACGGGAAGCTGCATTTTCTGCTGCTGTTTTGGGTGACAATGCTCTAATGGAGAAAGCATGGCAGGATACTGGAATGCTGGCAGAGGCTGTGCTTCATGCCCACGCACATGGACGGCCAACTCTGAAGAATTTGGTTCAGACCTGGAACCAAATTCTACAGAGAGAGGTTGAGCCTACTCCGTCACAAAAAACAGATGCTACATCTGCATTTCTAGCTTCTCTTGAGGAGCCTAAGCTTACGAGTTTGGCAGAAGCAGGGAAGAAGCCACCTATTGAAATCCTACCTCCGGGGATGATGTCACTTAATGCCCCTATCTCCATTCAGAAAAAACCAGCTTCTGCTACTCAGAATTCCCAACCACAACCAGGCAAGCCGTTAGCACTGGAAGCACCTCCTACAACCACAGCAGCGCCAGACAGTTCTGCGCAGCAGCCCGAATCTGCACCTGCACCTGCACCTACGCCTACACCTGCACCAGTTAGTGATCCACCTCCATCAGACTCCACGCCAACTCCTGAGGCTGCTCCACCTGAATCAATTTCTGGAGAAACCTCTGTAGATAATGGAGTTCCTATCGCAGCATCAGTGAGTGACAAAAATCCAAATATTAATGGGGAAACTGTTCAGGCAGAGCCTACAAGCGATCCAGCACCTCCTGAAGCCCCATCACCAGTAGCAGAGGTTTCAGAGACTAATATTCCAAATCCAACTACAGCGCCTGCAAGTGGCGACCCTTTCCTATGA 3993 0.4606 MLRLKAFRPSADKIVKIQLHPTHPWMVTADDSDRVSVWNWEHRQVIYELKAGGVDERRLVGAKLEKLAEGETESKGKPTEAIRGGSVKQVNFYDDDVRFWQLWHNRSAAAEAPTAVHTSSFSSPAPSTKGRHFLVICCLNKAIFLDLVTMRGRDVPKQELDNKSLHCMEFLYRSGVGDGPLVAFGASDGVIRVLSMITWKLARRYTGGHKGTISCLKSFMAASGEALLVSGASDGLLIIWSADHGHDSRELVPKLSLKAHDGGVVAVELSRVMGGAPQLITIGADKTLAIWDTISFKELRRIKPVPKLACHSVASWCHPRAPNLDILTCVKDSHIWAIEHPTYSALTRPLCELTTVIPPHALAPNKKLRVYCMVAHTLQPHLVAIGTNIGVVICEFDARSLPPVAPLLTPPDSREHSAVFVIERELKLLNFQLNNSVNPSLGNNSSLSETGRPQGDSFEPLTVKQGKKHISTPVPHDSYSVLSVSSSGKYLAIVWPDIPYFSVYKVSDWSIVDSGSARLLAWDACRDRFAILESSLPPRIPIIPKGSSSKRAKEAAAAQAAAAAAAAGSSASVQVRIVLDDGTSNILMRSVGARNEPVIGLHGGALLGVAYRTSRRISPIAATAISTIQSMPLSGYGSSGLSSFSTYDDGFSSHRSPAEAAPQNFQLYSWETFQPVGGLLPQPEWTAWDQTVEYCAFAYQQYIVISSLRPQYRYLGDVSIPYATSAVWHRRQLFVATPTTIEVVFVDAGVTQVDIETKKMKDEQKMREAQTRAISEHGELALITVEGPQSSTEERIPLRPPMLQVVRLASFQHAPSVPPFLSLPKQSRVDSDDPWTKEAEERRTSEVAVGGGGVSVAVTRFPTEQKRPVGPLVVVGVKDGVLWLIDRYMRAHALSLSHPGIRCRCLAAYGDAVSAVKWASRLGREHHDDLAQFMLGMGYATEALHLPGLSKRLEFDLAMKSNDLKRALHCLLTMSNSRDIGHDGTGLGLNDILNLTDKKQDVVEGVQGIVKFAKEFLELIDAADATAQGEIAREALKRLAAAGSVKGALQGHELRGLALRLANHGELTRLSGLINNLITLGLGREAAFSAAVLGDNALMEKAWQDTGMLAEAVLHAHAHGRPTLKNLVQTWNQILQREVEPTPSQKTDATSAFLASLEEPKLTSLAEAGKKPPIEILPPGMMSLNAPISIQKKPASATQNSQPQPGKPLALEAPPTTTAAPDSSAQQPESAPAPAPTPTPAPVSDPPPSDSTPTPEAAPPESISGETSVDNGVPIAASVSDKNPNINGETVQAEPTSDPAPPEAPSPVAEVSETNIPNPTTAPASGDPFL* 1331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0364 1330 ProSiteProfiles Trp-Asp (WD) repeats profile. 257 301 IPR001680 GO:0005515
Psa3g0364 1330 PANTHER TSET COMPLEX MEMBER TSTF 1 1322 - -
Psa3g0364 1330 MobiDBLite consensus disorder prediction 830 845 - -
Psa3g0364 1330 PANTHER BNAC07G49640D PROTEIN 1 1322 - -
Psa3g0364 1330 SUPERFAMILY WD40 repeat-like 11 316 IPR036322 GO:0005515
Psa3g0364 1330 MobiDBLite consensus disorder prediction 1231 1255 - -
Psa3g0364 1330 SMART WD40_4 1 39 IPR001680 GO:0005515
Psa3g0364 1330 SMART WD40_4 198 241 IPR001680 GO:0005515
Psa3g0364 1330 SMART WD40_4 250 292 IPR001680 GO:0005515
Psa3g0364 1330 MobiDBLite consensus disorder prediction 1214 1330 - -
Psa3g0364 1330 MobiDBLite consensus disorder prediction 1264 1294 - -
Psa3g0364 1330 Gene3D - 3 349 IPR015943 GO:0005515
Psa3g0364 1330 MobiDBLite consensus disorder prediction 827 848 - -
Psa3g0364 1330 Gene3D - 904 1153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0364 Psa-Chr3 35064938 35081176 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0364 - - gmx:100777567 2241.85