Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0293 ATGAACTTGAGTTTATCTAATGTTTCAATCTTTTTCGTTTTCAACGTGCAGGATGAGGAACTTCTACTATCACAGTTGCAAGCCTTTCCTACAATGAAAGAGGCTTTGTTCTCGGATGACCCTGATGCACAACTTGAAGCAACTGCTCAGTGTGGAAAGATGCTATCAAAGGGCTACATCCCTCATATTGATAAGGTGGTCCGGGCAGGTATTGTCCCTCGGCTTGTGACATTCTTGATCAGGGAGGAGATGCCTCAACTGCAGACCATGGCAGCATGGACTCTGGCCAACGTTGCCTCGGGATTGTCTGAGCATACAAGAACTGTGATTGAACATGGTGCTATTCCGCTGCTTGTGCAGCTTCTGAGCTCAAGTAGTGAGGAGATCAAAGAACAGGCAATGTGGGCATTAAGTAATATTGCCGGTGATTCCCCAAGCGCAAGGGATGATGTTTTTAATCATGGTGCACTCTCTCCATTATTGTCTATATTGTGGAGTCCTACTTGTATAGCAAAAAGTTCTACCAGTAAGATCGCTACATGGACTTTTTCAAATTTCTGCATCGGAAAGCCGCTTCCAATACTTCTTCAACAGGTACCACCAGCATTGCCTGCCATTCGGGAACTCTTGTCGATGCAGGATGAAGGAATTATACTACATGGATGCCTGACTCTCTGCTGCCTTACTCAAAAGGAATCAATCGAATTGAACCAAGCTATCATTGATGCAAATGTTTGCCCAAGACTTTTAGAGCTACTAGTTCATTCCAAGTCAAAAGTTTTTGTTCCTGCTCTTCGGGCTATAGGAAATATTTCTACTGGCAATGAAGTTCATAATAAGGTTCTAATTGACAGTGGAGGTCTCCCAGTTTTTAACTTTCTTCTTAAACAAAGTGATACATTTATCCTCCGAGAAGTTTGTTGGATAATTTCAAATATCGCAGGTGGGCCTACGGATCATGTACAGGCTATTATTGATGCAGATCTTATTAGTTCACTTGTCCATCTTACGAAGGCTGAATTCGAAATTGGGCAGCCGGCTGCCTGGGCTATTGTCAACACCACCTGTAATGCCACTCATGAGCAGATTCGGTTATTGTCGTGTCAAGGGTGCATCGAGGCACTCTGTGATCTCTTGACCTTAACAGACTCGAATATTCTGATAGAGTGTTTGGATGGACTGAATAACATATTAATTGTTGGAAAAGTTAACCAGGAAAAGGGATTGTATAACGGGGTCAATGTTTACGGTGGAATGATTGAGGAATGTGGAGGATTGGATAAGATTGCAAATTTGCAAAGCTATGACAACGATGAAATTTATAATAGGGCCGTGAATATTTTGGTGCAATATTTTCGTGAGAACCTTGAAATAGATGAGGAGAGTCTTGATGAAACCATGAAAAAGCATCTTGAAGTAGATGATAAGAATCTTCATAATAGTGTGGAAGAAACCGCAAAAGAGGGCCTTGAAGTTGAAGTAGATGAAAAGAATCTTCATATTAGTGTAGATGAAACCACGAAAGAGGACCTTGAAGTAGATAAAAAGAATCTTCATACTAGTGTGGATGAAACCATAAAAGAGGACCTTGAAGTAGGTGAAAAGAATCTTCATAATAGTGTGGATGAAACCATCAAAGAGGAAGATAAAAAAAATCTTCATAATAGTGTGGATGAAACCGTGAAAGAGGACCTTGAAGTAGATGAACAGAATCTTCATAATAGTGTGGATGAAACCATCAAAGAGGACCTTCAAGTAGATGACCAGGATCTTCTGGATAATGTGGTTGAAACCATGAAAGAGAACCTTCAAGTAGATGACCGACCAGGATCTTCTTAA 1839 0.4084 MNLSLSNVSIFFVFNVQDEELLLSQLQAFPTMKEALFSDDPDAQLEATAQCGKMLSKGYIPHIDKVVRAGIVPRLVTFLIREEMPQLQTMAAWTLANVASGLSEHTRTVIEHGAIPLLVQLLSSSSEEIKEQAMWALSNIAGDSPSARDDVFNHGALSPLLSILWSPTCIAKSSTSKIATWTFSNFCIGKPLPILLQQVPPALPAIRELLSMQDEGIILHGCLTLCCLTQKESIELNQAIIDANVCPRLLELLVHSKSKVFVPALRAIGNISTGNEVHNKVLIDSGGLPVFNFLLKQSDTFILREVCWIISNIAGGPTDHVQAIIDADLISSLVHLTKAEFEIGQPAAWAIVNTTCNATHEQIRLLSCQGCIEALCDLLTLTDSNILIECLDGLNNILIVGKVNQEKGLYNGVNVYGGMIEECGGLDKIANLQSYDNDEIYNRAVNILVQYFRENLEIDEESLDETMKKHLEVDDKNLHNSVEETAKEGLEVEVDEKNLHISVDETTKEDLEVDKKNLHTSVDETIKEDLEVGEKNLHNSVDETIKEEDKKNLHNSVDETVKEDLEVDEQNLHNSVDETIKEDLQVDDQDLLDNVVETMKENLQVDDRPGSS* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0293 612 Pfam Atypical Arm repeat 416 461 IPR032413 -
Psa3g0293 612 PANTHER IMPORTIN SUBUNIT ALPHA-4 25 461 - -
Psa3g0293 612 Pfam Armadillo/beta-catenin-like repeat 62 100 IPR000225 GO:0005515
Psa3g0293 612 Pfam Armadillo/beta-catenin-like repeat 238 272 IPR000225 GO:0005515
Psa3g0293 612 Pfam Armadillo/beta-catenin-like repeat 103 141 IPR000225 GO:0005515
Psa3g0293 612 SMART arm_5 59 100 IPR000225 GO:0005515
Psa3g0293 612 SMART arm_5 233 273 IPR000225 GO:0005515
Psa3g0293 612 SMART arm_5 317 356 IPR000225 GO:0005515
Psa3g0293 612 SMART arm_5 359 399 IPR000225 GO:0005515
Psa3g0293 612 SMART arm_5 144 188 IPR000225 GO:0005515
Psa3g0293 612 SMART arm_5 102 142 IPR000225 GO:0005515
Psa3g0293 612 SMART arm_5 275 315 IPR000225 GO:0005515
Psa3g0293 612 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 113 141 IPR000225 GO:0005515
Psa3g0293 612 PANTHER IMPORTIN ALPHA 25 461 - -
Psa3g0293 612 SUPERFAMILY ARM repeat 9 453 IPR016024 -
Psa3g0293 612 Gene3D - 24 453 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0293 Psa-Chr3 29186366 29190771 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0293 K15042 - cpap:110815307 432.565