Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4243 ATGAAGAATCATCCTCAACATAGATCAAATATCAAATGCAAATACAAATTTCAAGGAGATTATGCTAGCAAAATTTTTGGCCTCTCTTTCTCCTTCCTATTTTCTATTTGGTGCCTCATTTCCATCTTCCATTCTAGGCTTCACCTTGTTCATGGTTCTTATAAAGGAGGAGCTATGTTAGAGTTGAATGAATCAACCTGCATTAGTCAGAAACTAGCAAAACCAATGTACTCGGTTGCGGAAACAATTAGTATAGAGCAAGTATTTTGGCGAGCTTTAGGTAATGATAGTAGATTAGTGTGCAAGTTACAATCTAAACCAGAGGAAAAGAAGCTTCAATCATCGCATGCTTCTCTCGACGGTGAATTCCATAACATATCAGCATTAGGAAAGGAAGAAAAGCGCAACGATTCGCTTGTTAACATAACACATCGTCTTGAATCGGATGGTTCTGTGTACAATTACGCGTCTGAGTCGAAAGGTGCAAAGGTAGTGGCACATAATAAAGAAGCTAAAGGTGCTATAAATATATTAGGAAAGGATCATGACAAGTATTTGAGAAACCCTTGTTCTGTTGCTGGAAAGTTTGTTGTTATTGAACTTTCTGAAGAGACTTTAGTTGATTCTGTCAAAATTGCAAACTTTGAGCATTATTCTTCTAATTTCAAGGAATTTGAATTGGCCGGTAGTTTGATTTATCCGACCGAATCGTGGATCGAGCTAGGGAACTTTGTTGCTACCAATGTTAAGCATGCACAGGTTTTTAAACTACCTAAGCCTAATTGGGTGAGGTATTTGAAGTTGAGCTTGCTTAGTCATTACGGATCGGAGTTTTACTGCACGCTTAGTGTCGTAGAAATTTACGGTATCAACGCTATAGAGCGAATGCTTAAGGATCTAATAGTTACTTCTGTGGAATCCATTCCTCACAAGTTGCCAACTCAAAATATCAGTGACATTATAATAACGCCGCCTTTGAAATCAGAAGCGGATCAAATTGACAGAAAAGGTAATGAGATCGAAATTAAGAACGATACCGTGGCTGCTGAGATATCGAGCGTTAGCGATGACACGCAAAAGTTTGACGCGGAAGTGACGACAAATCCAATGATTGGGAACTTGGTTCCTGATCCTGTGATGGAACTTAGGCAACAGTTAAATGGCAGGATAACTGGTGACACTGTTCTGAAGATTTTGATGCAAAAAGTGAAGTCTGTGGAGGTAAACTTATCGGCATTAGAGGATTACATCAAAGAATTGAATAGAAGACAAGGGATTACAATACCAGATCTTGAGAAACAGATGTTTAAATTATCAGAAAGCTTGGAAAAAAGCAAGACAGAAATCAATGATCACCAGCATTGGAACACAAATATGGAAAAAGGAATATCAGAAGTTAAGTCATGGAAAGATGATCTATCATCTCAACTTAATGATTTAGCTAGAGAAAACAGCATGTTAAGATTAGATGTTGAAAGGGTTGCAAGGGATCAAGAAAATCTGGAAGCCAAAGAGCTTGTCGTGTTAGCGACGAGTCTTGCTTTCGTGTGCCTTGCAGTTTTGAAGATAATTTCAGCATGCCTGTTCTCATTTTTTACAATCAATGAAACCAGAGGATGGTTTACACTGATTCTATATTGCAGTTTAACAATATGCATAATTTTGTTCTATAGCTAG 1677 0.3781 MKNHPQHRSNIKCKYKFQGDYASKIFGLSFSFLFSIWCLISIFHSRLHLVHGSYKGGAMLELNESTCISQKLAKPMYSVAETISIEQVFWRALGNDSRLVCKLQSKPEEKKLQSSHASLDGEFHNISALGKEEKRNDSLVNITHRLESDGSVYNYASESKGAKVVAHNKEAKGAINILGKDHDKYLRNPCSVAGKFVVIELSEETLVDSVKIANFEHYSSNFKEFELAGSLIYPTESWIELGNFVATNVKHAQVFKLPKPNWVRYLKLSLLSHYGSEFYCTLSVVEIYGINAIERMLKDLIVTSVESIPHKLPTQNISDIIITPPLKSEADQIDRKGNEIEIKNDTVAAEISSVSDDTQKFDAEVTTNPMIGNLVPDPVMELRQQLNGRITGDTVLKILMQKVKSVEVNLSALEDYIKELNRRQGITIPDLEKQMFKLSESLEKSKTEINDHQHWNTNMEKGISEVKSWKDDLSSQLNDLARENSMLRLDVERVARDQENLEAKELVVLATSLAFVCLAVLKIISACLFSFFTINETRGWFTLILYCSLTICIILFYS* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4243 558 ProSiteProfiles SUN domain profile. 132 292 IPR012919 -
Psa2g4243 558 Coils Coil 403 423 - -
Psa2g4243 558 Gene3D - 174 300 - -
Psa2g4243 558 Coils Coil 470 490 - -
Psa2g4243 558 Pfam Sad1 / UNC-like C-terminal 167 289 IPR012919 -
Psa2g4243 558 PANTHER SUN DOMAIN-CONTAINING PROTEIN 5 61 557 - -
Psa2g4243 558 SUPERFAMILY Galactose-binding domain-like 191 286 IPR008979 -
Psa2g4243 558 PANTHER MEMBRANE PROTEIN CH1 RELATED 61 557 IPR045120 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4243 Psa-Chr2 424058356 424060761 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4243 - - gmx:102668828 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4243 2 424058356 424060761 Psa2g4243 2 424058356 424060761 ECH