Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4241 ATGACCAAACCTGAAAGACCACCGTCAAGCCGCACCAACCTCGCCTCATGTGTCGTCGCCACCATTTTCTTAGTCTTCGTCTTCATCATCATCTTCACTCTTTACTTCACACTTTTCAAACCACAGGATCCTAAAATCTCCGTCACCGCCGTCCAACTCCCTTCCTTCTCCCTCACAAACAACGGCACATCAGCTAATTTAACTTTCTCCCAATACGCTTCCGTTAGAAACCCTAACAGAGGAACGTTCTCACACTACGATAGCTCCTTTCAGCTTCTCTGCTATGGAAGACAAATCGGTTTCATGTTTGTTCCCGCCGGGAAGATCAATGCGAGGAGAACGGAATACATGGCCGCCACGTTTACCGTTCAGTCGCTTCCGTTGGGGTTGGAGGGAAATAGTTCTGATGGAGTTAATAGAGTTGGGCCGACGATGGAGATTGAGTCGACGATAGAGATGGCGGGAAGGGTGAGAGTGTTGAATCTGTTCAGTCATCATGTGGAGGCGAAAGCTGAATGCAGAGTCGCCATCGCCGTCGCGGATGGAACCGTTATAGACCTCAAATCTGAATTTCACCCTACTAAAATAGAAGAGCTGAAGATGGAAGAATATCTTGTCAAAATGAAGAATCTTGGTGACAAACTGAAGCTTGCAGGTGCACCTATGTCAAACTTTGATTTGACGATTCAAACACTCAAGGACTTAGACTTGGATTACAATTCAGTAGTTGTCAAACTATCTGATCAGATCAATCTATCTACAGGGCCTGTGAAGCATGAGTACTCTATTTTAGACAAAGTACCGGTACCGGGTACACATACGGTACTCGTATGGTACAATGTACCTATTTTTTATATTAGAGTTTCTTAA 870 0.4494 MTKPERPPSSRTNLASCVVATIFLVFVFIIIFTLYFTLFKPQDPKISVTAVQLPSFSLTNNGTSANLTFSQYASVRNPNRGTFSHYDSSFQLLCYGRQIGFMFVPAGKINARRTEYMAATFTVQSLPLGLEGNSSDGVNRVGPTMEIESTIEMAGRVRVLNLFSHHVEAKAECRVAIAVADGTVIDLKSEFHPTKIEELKMEEYLVKMKNLGDKLKLAGAPMSNFDLTIQTLKDLDLDYNSVVVKLSDQINLSTGPVKHEYSILDKVPVPGTHTVLVWYNVPIFYIRVS* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4241 289 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 5 186 - -
Psa2g4241 289 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 5 186 - -
Psa2g4241 289 Pfam Late embryogenesis abundant protein 74 173 IPR004864 -
Psa2g4241 289 SUPERFAMILY LEA14-like 24 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4241 Psa-Chr2 424032404 424036251 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4241 - - cam:101503027 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4241 2 424032404 424036251 Psa2g4241 2 424032404 424036251 ECH
Psa2g4241 2 424032404 424036251 Psa7g0559 7 37546576 37548635 PCT