Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4222 ATGGATGAAGAATTGGTTAATGAGAGAATTCAATTAGAGGCTTCTGAGGATTCACAGCGCCAGACCAAGGAGGATGATGTGTATTCACCGAAAATGGATAGCCGAAAACTTGTAAAATCGCAACAACCACTGGAATATAATGCTATTCTACAAGGTAAAAATGTAGTTCAGGCTGTTAGTGAAGCGGCTACGTCGCAGCATCCATATGCGACCGTTGAGGAACTAACGGTAAAAAGTTATAATGGTTCGAGCTTTGATATTGGTACATCAAATAGTCAGGTGCAAATGTATAATCAACAAAAACATTGGCAGAATCTTTATCAGATGACAAATAATTCTGGAAATGGAAATTCATTAAGTGATATTGGGTTGATAAGTAGTGGCCAGGCTACATCTAGTGCCTGGGAAGATATTGGATCTACATCTTTTCCGGAGTTATTAGCTAGAAAATTCCAGGCTACATCTAGTGCCTGGGAAGATATTGGATCTACATCTTTTCCGGAGTTATTAGCTAGAAAATCACACAGTGATGGTCAGAGCAATGCCATTGAACACTTGGCAGCTGCTGAGAGTAAAGAGGGTGCAGGTGATGTTCATCGAGGAATGCGGACAAAAGTATTATCCAAATCAGGGTTTGCTGAGTATTTTATTAAAAATTCATTGAAGAGTAAGGGTGTTGTACATAAAGGTCCATCTTCGGATCGCTTCTATGTTCAGTCTAAAGAGAAAAATCAGGAAAAGGCTGGCAGTGGTGCAAATCAGAATTGGATCAAGACTAGCATTGGCGCAGATCAGAATCAGATGAAGACCAGCACTGGTATAGATCAGAAACAAATGAAGACTGGTATTGGTGCTCCGTCGAACTCTAGTAAATCAGTGAAGTATGATTCCAAAACTGCAAACTTTCCCTTTCACAGCGATGCTTCTGTGCCTAAGTCTAGCATGACTGAATGTGACGGTGTAACATTGAGAGAATGGTTAAAATCTGGCCAGCGCAAAGAAGGAAAAATGGAAAGTTTTACTATATTTAGAAAGATAGTGGATTTGGTGGATGACTCTCACTCTCGGGGAATTGCATTGCATAACCTTTGTCCATCTTACATTAAATTGTTACCGTCCAATCAGGTCATGTACATTGGGTTACCTACTCAAACACAGATGGCAGACAGTGTTGTAAATCCTGAAGTTCTTAATTTAGATAATTCTTTTATTAGAAAAAGGGTGTCTGAGCAAGTAACATCTTCCTCTGTTGATATGGAGTCAAAGAAACAAAAAATTGATGAGAGTTTGAGGGTTACTGGGAGTGACTTGTGTGTTGAGACTGCTAATCATCATAAAGTTCAAATTCCTACAGTTGGATCACAATATGAGAAAGATAAACGATTTTCTCCGTATAATGCTAATCATCATAAAGTTCAAATTCCTACAGTTGGATCACAATATGAGAAAGATAAACGATTTTCTCCGTATAATTTTGGGAGAATGTCTAGCATCCCTTGTGTATCTAATACAGGTGAATTTTCATCTACATCTTTATGTGAAAGATGGGAAAATAAGTGGTACGCAAGTCCGGAGGGAGGTTGCACAACATCATCAAACATCTACTGCCTAGGTGTACTCCTTTTTGAGTTACTAGGTCATTTTGACTCTGAAAAAGCACATATTGCAACAATGTCTGATCTTCATCATAGGATTCTTCCTCCAGCTTTCCTATCAGAAAATCCTAAGGAAGCTGGCTTTTGTCTTTGGCTGCTGCATCCTGAACCATCATCACGTCCAACAACAGGGGAAATCCTACAATCCGAAGTGATTAATGGATTACAGGAGCTATGTAGTGAGGAATTGTCATCACGTATAGACAAAGAAGATGCTGAGTCAGAATTATTATTGCATTTCCTCATCTCATCGAAAGAGCAGAAGCAGAGCGATGCCTCCAAATTATATAGAAGAGCAGAGAAGAGGCATAGCTCAAGAAAATCCTTTGTTTCCTCTGGCCTGCAGAACAATTACTCTTGTCAGAAAGAGATTATGCCTCTTAGAAAGGAACTTTTGAGTGTAGAAATGCTGCCCACAGTATCCCCAATCTCTAATACAACTGAAATGAGATTAATGAGAAGCATAGGCCATCTTGAAAGTGCTTACTTTTCCATGAGATCTAAGGTTCAGCTTTCTGAAACAGGTGCCACAGATCACCCAGAGAAAGATATACTAAAGAACTCGCGAGAACTGGTGTGGGACACAAAAGGCGAAGAAAAACATAAAAGCTTTGATCGGGATGAAGATTACTTTGCTTCTGCTGGGATATCTAAGAAAATAAAAATCTTTGACTTCAATACACTTTGCAATGATTCTGTCGATATCCATTATCCTGCAGTTGAGATGTCAAACAGATCAAAGCTCAGCTGTGTTTGCTGGAATAACTATATTAAGAATTATCTTGCCTCTACAGACTACGACGGTGTAGTGAAGTTATGGGATGCTAGTACAGGTCAAGAATTTTCTCAGTACAGTGAACATGAAAAGAGGGCTTGGTCTGTTGACTTTTCTCCAGTATGTCCTACAAAATTTGCCAGTGGAAGTGATGATTGTACTGTCAAGCTGTGGAGCATCAGTGAGAGAAACTGTTTAGGCACAATCCGGAATGTTGCTAATGTATGCTGTGTTCAATTTTCTGCTCATTCCTCTCATTTGCTAGCTTTTGGATCTGCAAATTATTCAACTTACTGTTACGATCTTCGCAATCTTAGAAGTCCCTGGTGTGTACTGGTTGGCCACCGTAAAGCTGTAAGCTATGTCAAATTCTTAGACTCTGAAACACTTGTTTCTGCCTCTACTGATAATTCATTAAAGATATGGGATCTCAATAAAACCTCTTCGGCTGGTGCATCTACAAGTGCTCGCAGCCTAACCCTGGCTGGACATACTAATGAGAAGAATTTTGTGGGGTTATCGGTTGCTGATGGATACATTGCGTGTGGTTCAGAATCAAATGAGGTTTACACCTACTATAAAACGCTTCCCATGCCAATTACTTCACACAAGTTTGGATCTATTGATCCCATTTCTGGTAAAGAGACCGATGATGACCAAGGTCAGTTTGTTTCAAGTGTATGCTGGAGAGGGAAATCAAACATGCTTCTTGCGGCCAATTCAAGTGGATGTATAAAAGTGTTGCAGATGGTTTAA 3186 0.3961 MDEELVNERIQLEASEDSQRQTKEDDVYSPKMDSRKLVKSQQPLEYNAILQGKNVVQAVSEAATSQHPYATVEELTVKSYNGSSFDIGTSNSQVQMYNQQKHWQNLYQMTNNSGNGNSLSDIGLISSGQATSSAWEDIGSTSFPELLARKFQATSSAWEDIGSTSFPELLARKSHSDGQSNAIEHLAAAESKEGAGDVHRGMRTKVLSKSGFAEYFIKNSLKSKGVVHKGPSSDRFYVQSKEKNQEKAGSGANQNWIKTSIGADQNQMKTSTGIDQKQMKTGIGAPSNSSKSVKYDSKTANFPFHSDASVPKSSMTECDGVTLREWLKSGQRKEGKMESFTIFRKIVDLVDDSHSRGIALHNLCPSYIKLLPSNQVMYIGLPTQTQMADSVVNPEVLNLDNSFIRKRVSEQVTSSSVDMESKKQKIDESLRVTGSDLCVETANHHKVQIPTVGSQYEKDKRFSPYNANHHKVQIPTVGSQYEKDKRFSPYNFGRMSSIPCVSNTGEFSSTSLCERWENKWYASPEGGCTTSSNIYCLGVLLFELLGHFDSEKAHIATMSDLHHRILPPAFLSENPKEAGFCLWLLHPEPSSRPTTGEILQSEVINGLQELCSEELSSRIDKEDAESELLLHFLISSKEQKQSDASKLYRRAEKRHSSRKSFVSSGLQNNYSCQKEIMPLRKELLSVEMLPTVSPISNTTEMRLMRSIGHLESAYFSMRSKVQLSETGATDHPEKDILKNSRELVWDTKGEEKHKSFDRDEDYFASAGISKKIKIFDFNTLCNDSVDIHYPAVEMSNRSKLSCVCWNNYIKNYLASTDYDGVVKLWDASTGQEFSQYSEHEKRAWSVDFSPVCPTKFASGSDDCTVKLWSISERNCLGTIRNVANVCCVQFSAHSSHLLAFGSANYSTYCYDLRNLRSPWCVLVGHRKAVSYVKFLDSETLVSASTDNSLKIWDLNKTSSAGASTSARSLTLAGHTNEKNFVGLSVADGYIACGSESNEVYTYYKTLPMPITSHKFGSIDPISGKETDDDQGQFVSSVCWRGKSNMLLAANSSGCIKVLQMV* 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4222 1061 PANTHER PROTEIN SPA1-RELATED 2 38 752 IPR044630 GO:0009640
Psa2g4222 1061 PANTHER PROTEIN SPA1-RELATED 2 755 1061 IPR044630 GO:0009640
Psa2g4222 1061 MobiDBLite consensus disorder prediction 7 33 - -
Psa2g4222 1061 Pfam WD domain, G-beta repeat 831 869 IPR001680 GO:0005515
Psa2g4222 1061 Pfam WD domain, G-beta repeat 921 953 IPR001680 GO:0005515
Psa2g4222 1061 PANTHER PROTEIN SPA1-RELATED 2 755 1061 - -
Psa2g4222 1061 PANTHER PROTEIN SPA1-RELATED 2 38 752 - -
Psa2g4222 1061 SUPERFAMILY Protein kinase-like (PK-like) 514 611 IPR011009 -
Psa2g4222 1061 Gene3D - 721 1061 IPR015943 GO:0005515
Psa2g4222 1061 Gene3D Transferase(Phosphotransferase) domain 1 318 613 - -
Psa2g4222 1061 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 836 871 - -
Psa2g4222 1061 ProSiteProfiles Trp-Asp (WD) repeats profile. 922 962 IPR001680 GO:0005515
Psa2g4222 1061 ProSiteProfiles Trp-Asp (WD) repeats profile. 836 878 IPR001680 GO:0005515
Psa2g4222 1061 ProSitePatterns Trp-Asp (WD) repeats signature. 813 827 IPR019775 -
Psa2g4222 1061 MobiDBLite consensus disorder prediction 1 36 - -
Psa2g4222 1061 SMART WD40_4 740 776 IPR001680 GO:0005515
Psa2g4222 1061 SMART WD40_4 964 1003 IPR001680 GO:0005515
Psa2g4222 1061 SMART WD40_4 872 911 IPR001680 GO:0005515
Psa2g4222 1061 SMART WD40_4 1011 1059 IPR001680 GO:0005515
Psa2g4222 1061 SMART WD40_4 786 826 IPR001680 GO:0005515
Psa2g4222 1061 SMART WD40_4 829 869 IPR001680 GO:0005515
Psa2g4222 1061 SMART WD40_4 915 953 IPR001680 GO:0005515
Psa2g4222 1061 ProSiteProfiles Trp-Asp (WD) repeats profile. 793 835 IPR001680 GO:0005515
Psa2g4222 1061 ProSitePatterns Trp-Asp (WD) repeats signature. 940 954 IPR019775 -
Psa2g4222 1061 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 922 955 - -
Psa2g4222 1061 PRINTS G protein beta WD-40 repeat signature 813 827 IPR020472 -
Psa2g4222 1061 PRINTS G protein beta WD-40 repeat signature 856 870 IPR020472 -
Psa2g4222 1061 PRINTS G protein beta WD-40 repeat signature 940 954 IPR020472 -
Psa2g4222 1061 SUPERFAMILY WD40 repeat-like 744 1059 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4222 Psa-Chr2 423219529 423227845 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g4222 810 971 Miscellaneous Gene Families AT5G08390 24.432 7.66e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4222 K16240 - gmx:100778303 1455.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4222 2 423219529 423227845 Psa2g4222 2 423219529 423227845 ECH