Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4196 ATGGAATCCAACACGTCGTCAGCGATGCCACCGGATTTGGCTTCAATGAACGGAACGACAAATCCAGTGTCGCCATCGCTAGTCAATTTGTATAGAATAACCAAAGTTCTGGAGCGTTTGGCTTTTCACTTTCAACCTGGCAACCGAAGCGATCCTTTCGAATTTTTTAACCTATGCCTATCCCTCTCTCGAGGGATTGATTATGCACTTGCCAATGGTGAGCCTCCGCCGAAAGCTAATGACCTGCCTACCTTGATGAAACAGATGTATCAAAGAAAGACTGATGAACTATCACTAGCAGCTGTGATGGTTTTGATGATATCTGTGAAGAATGCCTGTAAAATTGGATGGTTCCAGAAGAAAGAGTCAGAAGAACTTTTAACTATTGCTGACGAGATAGGAAAGATCTACTGCACCCTGGGAAATGTTAGTACCGGACCTAGTTCTAGCCATTCTGCAGTGTTAACTATAATGGAAAGGTTCTATCCAAAATTGAAACTGGGTCCAATAATTGTGTCAATCGAAGCTCAGCCTGGATATGGAGCTTCTGCTGTTGATTTCCATATCACAAAGAACAATGTTCATTCAGATAGAAAAATTTGGTTATTGGTGGCACAAACTGATAACATTGAGACATCTGCATGCCTCATCAGCCCTCAGCAAGTGAATTTTCTCCTGAATGGAAAAGGAATTGACACAAGGACTAACTTTCGAATGGATCCTGGGCCACAGATGCCCACTAATGTGACTAGTGTGCTTAAATTTGGGACAAATCTGCTTCAAGCCGTGGGTCAGTTCAATGGTCATTATATTATACTTATTGCCTATATGAGTGTTGCATCCTTGCCCGAGCATCCAGTTCTTCCACCAGATTATGTTCAGCCTGCTGTTACATCCGTCGATTCAGATTCAGATATTATCGAGGGGGCATCACGATTCTCACTTAATTGTCCGATAAGCTTTACACGAATCAAGACTCCTGTTAAAGGTCGGTCATGCAAACATTTCCAGTGCTTTGACTTTGACAACTTCATTAAAATAAATTCTAAGAGACCATCCTGGCGCTGCCCCCATTGCAATCAGAATGTTAGCTATACAGAGATTCGTCTAGACAGAAACATGATTGAGATCCTGGAAAAAGTTGCCGAGAACATTGTGGAAGTGACTGTCCATGCTGATGGATCGTGGCAGCCAGTTTTGGAAAAAAATCATGATGTGGATAAGATACAGAACAAGGTCCACAATTGTGAAAAGGAACAAACTGAACAGCAAGAATCTACTCACTCACCTGATACATTTCCCCACGTCGTGGACCTCACCAACAAAGATAATGACATGGACATAATAATGGATACTTGTGAAACTGCAGATAGAAAGCCTTCACAGGGTTCTGCTCCGACGAGTGTTCAAATCGAAGACGATTTTTGGGCTGGACTTTATATTGCCAACAGTAGGTCTGATACTCCTACAGTTGGTGTCACTGACCTTCCTGTTCTGGCAGATGCTGTTTCTCCTGCATTAATTCAAGAAGCTGAGGGTCATGATAATATTTCTGCCGTGCATAACCAGTTCCCGGCACTGAGTAATTTGCAGATGATGAATTATATGAATTCATTTGTTAGTGAGTATGGGAGGTCATCCTTGTCACCGAGACATATTCATAGGACTCCAGTTGCTGTTCAGGCCCTTCCAGTCCAATCTCAGCCATTAGGACCACAGCAAAATTCAGTAACCAATTTGGATTCCTTGATAACCAGCAGTCCCTCTGCTACTCATGTTTCCTTGTCCAACTCTGCCACCGCAGATCCTTACAATGCCATACTGAGTGATGCAGAAAGACAACAACTTTTTTCTCGTTCCCCGCTGAACACGCCTCAGGTCTCAGCAGCAACACAGAATCGAATGCCAGCAGTTAATATGCCAGCCCCAACTCATAATCGAGTGCCACCAGTTAGTATGTCAGCCACAACTCTTAACCGAGCACCAAGTCATTTGCAAAACCAACAATACAGAGCAGGTATACTGAATGATTTTAGAAATTCCCACCTGCAGCAAACTCTTAATCCCCGGGCACACCCACCAATGCAACCATTAAATGCCCATCGATCTCACATTCAACAAGGGATTTCACAAGCTAATGCAGCTGGAGGTGCAGCAAATAGCCAACAAGCAAGGGTTATGGCTTCATCACATGTTGCCAGACAAGGAGAGCAAAGAGGACCACCGGTACAGGCAGTTTCTAGGACTGACGAATTATTCAATTCACAACCAGATCAGAATTGGCGTCCTACTTCAAGAATGCGTGGAAGTCTTTCAGGTCAGCAGCTTACTGAAGATGTTAGGCAGCGATTAATTATGCCATCATCACAAGAAGCTCAAAGTTCACGACCACAAGGTCCACCACAACCAGGGCGAACAACGTCTCAACTGAATGTGCTCATTGCAAACAGTAGAAATGCTCATAATCCTCCGAGACCTTAA 2481 0.4365 MESNTSSAMPPDLASMNGTTNPVSPSLVNLYRITKVLERLAFHFQPGNRSDPFEFFNLCLSLSRGIDYALANGEPPPKANDLPTLMKQMYQRKTDELSLAAVMVLMISVKNACKIGWFQKKESEELLTIADEIGKIYCTLGNVSTGPSSSHSAVLTIMERFYPKLKLGPIIVSIEAQPGYGASAVDFHITKNNVHSDRKIWLLVAQTDNIETSACLISPQQVNFLLNGKGIDTRTNFRMDPGPQMPTNVTSVLKFGTNLLQAVGQFNGHYIILIAYMSVASLPEHPVLPPDYVQPAVTSVDSDSDIIEGASRFSLNCPISFTRIKTPVKGRSCKHFQCFDFDNFIKINSKRPSWRCPHCNQNVSYTEIRLDRNMIEILEKVAENIVEVTVHADGSWQPVLEKNHDVDKIQNKVHNCEKEQTEQQESTHSPDTFPHVVDLTNKDNDMDIIMDTCETADRKPSQGSAPTSVQIEDDFWAGLYIANSRSDTPTVGVTDLPVLADAVSPALIQEAEGHDNISAVHNQFPALSNLQMMNYMNSFVSEYGRSSLSPRHIHRTPVAVQALPVQSQPLGPQQNSVTNLDSLITSSPSATHVSLSNSATADPYNAILSDAERQQLFSRSPLNTPQVSAATQNRMPAVNMPAPTHNRVPPVSMSATTLNRAPSHLQNQQYRAGILNDFRNSHLQQTLNPRAHPPMQPLNAHRSHIQQGISQANAAGGAANSQQARVMASSHVARQGEQRGPPVQAVSRTDELFNSQPDQNWRPTSRMRGSLSGQQLTEDVRQRLIMPSSQEAQSSRPQGPPQPGRTTSQLNVLIANSRNAHNPPRP* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4196 826 Pfam MIZ/SP-RING zinc finger 314 361 IPR004181 GO:0008270
Psa2g4196 826 PANTHER E4 SUMO-PROTEIN LIGASE PIAL2-LIKE 35 717 - -
Psa2g4196 826 MobiDBLite consensus disorder prediction 748 818 - -
Psa2g4196 826 MobiDBLite consensus disorder prediction 709 826 - -
Psa2g4196 826 CDD SP-RING_PIAS_like 314 361 - -
Psa2g4196 826 SUPERFAMILY RING/U-box 313 391 - -
Psa2g4196 826 ProSiteProfiles Zinc finger SP-RING-type profile. 302 383 IPR004181 GO:0008270
Psa2g4196 826 MobiDBLite consensus disorder prediction 709 729 - -
Psa2g4196 826 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 291 399 IPR013083 -
Psa2g4196 826 Coils Coil 406 426 - -
Psa2g4196 826 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 35 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4196 Psa-Chr2 422315604 422327071 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4196 K04706 - gmx:100780539 916.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4196 2 422315604 422327071 Psa2g4196 2 422315604 422327071 ECH