Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4193 ATGAAAGATTCAGACAAAATCATTACCCCAACCTCCGTTGCTGTCACTCCATCACACCAACAACGAACCTCCCCAAAGCTCTTCATGCTATGGCTCATCCTCGCCGTCTCTCTCACCTACTTCATCTACACTCTCAAACTCGTCTCCACTTCAACCACCTGCAACCACCCTCCATTCTCCATCAACCTCCACACATCCACCATCAACACTTCAACAACTTCTCACAAAACAGACCTCAAACACGTCGTGTTCGGAATCGCCGCATCCTCAAAACTCTGGCCACAGAGAAAAAACTACATAAAACTCTGGTTCAACAACAGAACAATGAGAGGAATCGTTTGGATGGACGATACAGTAAAAACAGACCCAAGCGAAGGTCTTCCAATGGTGAGAATCTCAGCCGACACATCCAATTTTCCTTACACAAACAAACAGGGTCACCGTTCCGCGATTCGAATCTCGCGAATCGTTTCCGAAACGGTGCGTTTAGGGCTGAAGGATGTGCGGTGGATTGTAATGGGAGACGACGACACCGTTTTTGTAACGGATAATTTAATTAGGGTTTTGAATAAGTATGATTACAAAGAGTATTATTACATTGGAAGCTTATCGGAGAGTCATTTGCAGAATATATATTTTTCTTATGGCATGGCTTACGGTGGTGGTGGATTTGCGATTAGTTATGGATTAGCGAAAGCTCTTGTGAAAATGCAGGATCGGTGTATTCATAGGTATCCCGGACTTTATGGTTCTGATGATCGAATGCAAGCTTGTATGGCGGAACTCGGTGTTCCACTCACCAAAGAAATCGGTTTTCATCAGTATGATGTGTATGGGAACTTATTTGGGCTTCTTGCAGCTCATCCAGTGACTCCATTGGTATCACTACACCATCTTGATGTGGTTGAGCCGATCTTCCCTAATGCCACAAGAGTCGAAGCACTTCAACACCTTACGGTACCGATGAAGCTTGACTCAGCCGGACTCATTCAGCAATCCATCTGCTACGACATAGAAAAGAGATGGACGATTTCAGTTTCATGGGGTTTTGCAGTACAGATATTTCGCGGGATATTTTCGCCTCGCGAAATTGAAATGCCTTCAAGAACATTCCTTAATTGGTATAGAAGAGCTGATTACACTGCATATGCTTTCAACACGCGGCCGGTTACACGAAATCCGTGTCAGAAGCCTTTTGTGTTTTACCTTTCAAAGGCCAAATTCAATTCTACAATGCATCAGACAGTGAGTGAATATGAAAGGCATCGTGTTCCTCATCCAGAATGTCGATGGAAAATGGATGATCCTTCGGCTCTCGACAAAATTGTTGTATATAAGAAACCAGACCCACATCTATGGGATAGGGCTCCAAGGAGAAACTGTTGCAGAGTGATGAAGTCAAACAAGAAAGGAAGAATGGTGATGGATGTTGGAATATGTAGAGATGGCGAGATATAG 1458 0.439 MKDSDKIITPTSVAVTPSHQQRTSPKLFMLWLILAVSLTYFIYTLKLVSTSTTCNHPPFSINLHTSTINTSTTSHKTDLKHVVFGIAASSKLWPQRKNYIKLWFNNRTMRGIVWMDDTVKTDPSEGLPMVRISADTSNFPYTNKQGHRSAIRISRIVSETVRLGLKDVRWIVMGDDDTVFVTDNLIRVLNKYDYKEYYYIGSLSESHLQNIYFSYGMAYGGGGFAISYGLAKALVKMQDRCIHRYPGLYGSDDRMQACMAELGVPLTKEIGFHQYDVYGNLFGLLAAHPVTPLVSLHHLDVVEPIFPNATRVEALQHLTVPMKLDSAGLIQQSICYDIEKRWTISVSWGFAVQIFRGIFSPREIEMPSRTFLNWYRRADYTAYAFNTRPVTRNPCQKPFVFYLSKAKFNSTMHQTVSEYERHRVPHPECRWKMDDPSALDKIVVYKKPDPHLWDRAPRRNCCRVMKSNKKGRMVMDVGICRDGEI* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4193 485 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 10 485 - -
Psa2g4193 485 Gene3D - 69 322 - -
Psa2g4193 485 PANTHER FRINGE-RELATED 10 485 - -
Psa2g4193 485 Pfam Protein of unknown function, DUF604 209 462 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4193 Psa-Chr2 422204434 422208438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g4193 22 485 Glycosyltransferase AT4G23490 67.748 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4193 - - twl:119986480 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4193 2 422204434 422208438 Psa2g4193 2 422204434 422208438 ECH