Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4192 ATGTCGTTATGTTTTGATATAAAACTATCCAGCACTTCGGTTTTGCGCGCCAAATCAAACAGAAATCAAAACTTTGAGAAATCATTTCACTCTCTAATGGAAGATCTCCGAAATTCGACGCTAAAGTTTTTCACCGATCAAGAGCTTTGTTATGCTGACATCGTTCCTCCGACTCAGGTTCGAGCAAGAATTGAAGTGTCAGTGCTCAGTTTCCTCAAAATATTGAATGCATCTAACCCTGCAATCTCTGATTTGCCTTTGATTCAAAGAAAATTGAGCAACAGTCGGATGAATCATGGCCTGTTAACCGAATTATCATATGTTTTTCTCTCCAATTCTGTATCTATAAGGTCTCTTATGAGACCTAATGCTGGAAAAGCCTTTGTTAGGGTGTGGAAGGTAATGGAAATGTGCTATCAGATATTGCTTAAGGAAAAGCGTGTCACACAGAGAGAACTCTTCTACAAACTGTTGTGTGATTCGCCACATCTGTTTCCTTCTCAAAAGGATGTCAATAGGACAATCCAAGATCTTGTAGCGTTGCTTCGGTGCAGCAGATACAGTCTTGGAATCATGGCATCTAGTCGTGGACTCATTGCTGGCCGTCTGATTATGCAGGAACCAGGCAAAGAGGCCGTTGATTGCTCAGTGTGTGGATCTTCTGGACATACAGTTTCTGGTGATTTGAGTTTGTTAGATAAATTGGTTCTAAATGCAGATGCACGGTACATTATCATTGTGGAAAAGCATGCAATATTTCAACGGCTTGCTGAAGATAGGTTTTTTAGTCAGATTCCAAGCATTCTTATCACGGCTAAAGGCTACCCAGATATGGCCACAAGATTTCTTCTTCATCGAATCAGTAGAGCATTTCCAGACTTGCCAATTTTAGCTTTGGTGGATTGGAATCCAGCTGGATTAGCTATACTATGCACCTTCAAATTTGGAAGTGTAGGAATGGGCCTAGAGTCATATAGATACGCTTGCAATGTCAAGTGGTTAGGACTGCGGGGGCATGATCTACCCATGCTTCCTGATCAATCTTTCGTTCCATTGAAGACAAAGGACCTACAAATTGCTCAAAGCTTAATGTCCTCCAAAATCTTACAGGAGAATTACAAGGAAGAGGTTGCGTTGATGGTTCAGAGCGGCAGGAGAGCTGAAATAGAAGCCCTATACTTTCATGGATATGATTATTTGGGGAAGTACATAGCTAAGAAAATTGTACAGTCCGATTATATATGA 1245 0.4088 MSLCFDIKLSSTSVLRAKSNRNQNFEKSFHSLMEDLRNSTLKFFTDQELCYADIVPPTQVRARIEVSVLSFLKILNASNPAISDLPLIQRKLSNSRMNHGLLTELSYVFLSNSVSIRSLMRPNAGKAFVRVWKVMEMCYQILLKEKRVTQRELFYKLLCDSPHLFPSQKDVNRTIQDLVALLRCSRYSLGIMASSRGLIAGRLIMQEPGKEAVDCSVCGSSGHTVSGDLSLLDKLVLNADARYIIIVEKHAIFQRLAEDRFFSQIPSILITAKGYPDMATRFLLHRISRAFPDLPILALVDWNPAGLAILCTFKFGSVGMGLESYRYACNVKWLGLRGHDLPMLPDQSFVPLKTKDLQIAQSLMSSKILQENYKEEVALMVQSGRRAEIEALYFHGYDYLGKYIAKKIVQSDYI* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4192 414 CDD TOPRIM_TopoIIB_SPO 242 399 IPR034136 -
Psa2g4192 414 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 47 414 IPR002815 GO:0003677|GO:0003918|GO:0005694
Psa2g4192 414 Gene3D - 195 414 - -
Psa2g4192 414 Pfam Type IIB DNA topoisomerase 126 191 IPR013049 GO:0003677|GO:0003824|GO:0005524|GO:0005694|GO:0006259
Psa2g4192 414 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 47 414 - -
Psa2g4192 414 Gene3D - 54 194 IPR036388 -
Psa2g4192 414 SUPERFAMILY DNA topoisomerase IV, alpha subunit 127 414 IPR036078 GO:0003677|GO:0005694
Psa2g4192 414 PRINTS DNA topoisomerase VI subunit A family signature 168 185 IPR002815 GO:0003677|GO:0003918|GO:0005694
Psa2g4192 414 PRINTS DNA topoisomerase VI subunit A family signature 186 201 IPR002815 GO:0003677|GO:0003918|GO:0005694
Psa2g4192 414 PRINTS DNA topoisomerase VI subunit A family signature 244 261 IPR002815 GO:0003677|GO:0003918|GO:0005694
Psa2g4192 414 PRINTS DNA topoisomerase VI subunit A family signature 268 289 IPR002815 GO:0003677|GO:0003918|GO:0005694
Psa2g4192 414 PRINTS DNA topoisomerase VI subunit A family signature 301 317 IPR002815 GO:0003677|GO:0003918|GO:0005694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4192 K10878 - gmx:100784732 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4192 2 422161639 422165910 Psa2g4192 2 422161639 422165910 ECH