Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4183 ATGGCTGCATCTGCATCTTCTTTAACAGCACTTTCCTTCTCCTTCCCATTCATAACATCTACCAAATCTTCTCTCCCAGTTCCATTCTCTTGCTCTTTTCCTCGCAATCTCCATCTCAAATCACCACGAATCGTCTCAGTCTCCGGAGCTGCAACTCCCACCACCTCCGTTGAAATTGATAAATCCCCAATCTCCGCCACTCCTAACAAGGTTCTTCCGTTTCGGGTTGGGCACGGGTTTGACCTTCATCGATTGGAACCCGGTTATCCCTTAATTATTGGTGGAATTAACATACCTCATGATAGAGGTTGCGAGGCTCATTCTGATGGGGATGTTCTGCTTCACTGCGTGGTTGATGCAATTTTAGGCGCTTTAGGTCTTCCTGATATAGGACAGATTTTTCCTGATAATGATCCTAAGTGGAAGGGTTGTGACTCTTCCGTGTTCGTCCATGAATCTGTCAGGCTTATGCATGAGGCTGGTTATGATATCGGAAATTTAGATGCTACATTGATACTTCAGAGGCCGAAACTAAGCCCACACAAGGATGCTATCAAGGCCAACTTATCCGCATTGCTTGGAGTTGACTCATCTGTGGTAAATATAAAGGCAAAAACTCATGAAAAGGTTGATAGCCTTGGAGAAAATAGAAGTATAGCAGCTCACACAGTTGTTCTTCTAATGAAGAAATGA 693 0.4401 MAASASSLTALSFSFPFITSTKSSLPVPFSCSFPRNLHLKSPRIVSVSGAATPTTSVEIDKSPISATPNKVLPFRVGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDNDPKWKGCDSSVFVHESVRLMHEAGYDIGNLDATLILQRPKLSPHKDAIKANLSALLGVDSSVVNIKAKTHEKVDSLGENRSIAAHTVVLLMKK* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4183 230 Pfam YgbB family 74 227 IPR003526 GO:0008685|GO:0016114
Psa2g4183 230 PANTHER 2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE 19 230 - -
Psa2g4183 230 Hamap 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 74 229 IPR003526 GO:0008685|GO:0016114
Psa2g4183 230 TIGRFAM ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 75 229 IPR003526 GO:0008685|GO:0016114
Psa2g4183 230 ProSitePatterns 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 108 123 IPR020555 GO:0008685
Psa2g4183 230 PANTHER 2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE, CHLOROPLASTIC 19 230 IPR003526 GO:0008685|GO:0016114
Psa2g4183 230 CDD MECDP_synthase 75 227 IPR003526 GO:0008685|GO:0016114
Psa2g4183 230 SUPERFAMILY IpsF-like 73 229 IPR036571 GO:0008685|GO:0016114
Psa2g4183 230 Gene3D - 71 230 IPR036571 GO:0008685|GO:0016114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4183 K01770 - gmx:100306378 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4183 2 422007307 422009729 Psa2g4183 2 422007307 422009729 ECH