Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4143 ATGTGCCAGTTATCATCATCAACCTCTTCTGTCTCCACTTTGTGTGAAACTAATAACAACCAAACAAACATATCCACAACCAAACTCAAGAAACCTGACATGTTTACACCATTGATCCCTAAATCCCCAACATTCAAACAACAAGAAACCCACACAAAAAAAACCCATTTTTCTCTTGCCATCAATGAAGCCAAACACATTTCAAACATAGCGTTACCTATGGTTTTAACAGGCTTATTAATGTACTCTCGTTCCATCATTTCAATGTTGTTTCTCGGCCGTGCTGGCGAACTCGCTTTAGCAGGTGGATCACTTGCTATAGGGTTCGCCAACATAACCGGTTACTCCATTCTCTCTGGTCTCGCCATGGGAATGGAGCCTATTTGTGGTCAAGCTTTTGGTGCTAAAAGATTCAAACTCCTTGGTCTTACAATGCAAAGAACAATGATTCTTCTTCTTGTAACATCCATTTTCATTTCATTCTTGTGGCTTAACATGAAGAGAATTCTGCTTTTATGTGGCCAACAAGAAGATATAGCAAACGTTGCGCAATCATACATTCTTTATTCTCTTCCTGATCTCGTAGCGCAATCATTGCTACACCCTTTGCGAATCTATCTTCGAAGCCAATCCATAACACTTCCTTTAACATACAGTGCTACTCTGTCGATACTTCTTCATCTTCCTATAAACTATTTTCTTGTTTCTGTCCTCAACTTAGGAATCAAAGGAATCGCGTTAGGTTCGGTTTGGACGAACTTCAACCTCGTTGCTTCGTTGATTATTTACATTTGGGTTTCTGGAACACACAAGAAGACATGGAATGGCTTTTCATCTTCTTGTTTCAAGGGATGGAAATCGCTTTTGAATTTAGCAATTCCGAGCTGCATTTCGGTTTGTCTCGAATGGTGGTGGTACGAGATCATGATTTTAATCTGCGGTTTATTGATTAATCCACATGCAACTGTTGCTTCTATGGGTGTTTTGATTCAAACAACTGCGTTAATATACATTTTTCCTTCTTCATTGAGTTTCGGCGTTTCGACAAGAGTTAGTAATGAACTTGGTGCTGAAAATCCACATAAAGCAAAACTTGCAGCCATAGTAGGACTCTGTTTTAGTTTTGTTTTGGGCTTCTCAGCTTTGTTCTTTGCATTTTCGGTTCGAAACATTTGGGCTTCAATGTTCACAAATGATCCACAAATCATTGCTTTAACTTCAATGGTGCTACCTATCATAGGACTTTGCGAGCTCGGAAACTGTCCACAAACAACGGTTTGTGGCGTTTTGCGAGGGACTGCTCGGCCGAAGTTGGGCGCGAATATTAACTTAGGATGTTTTTATCTCGTGGGAATGCCTGTCGCGGTTTGGTTGAGTTTTGTTGCTGGATTTGATTTCAAAGGTTTATGGTTTGGTCTTTTGGCTGCTCAAGGTTCTTGTATGGTGACAATGTTGTTTGTTTTGTTTCGTACCAATTGGGAAAATCAAGTAGAAAGAGCGAAGGATCTGACATCGTCTGATCCGAGCGAAGAAGATGAACAAGAAGAAGAGAAAGGATTTGTGAGTTCATGTGACATAAAAGAGTGTTCTAATTCATTAGTTTGA 1605 0.3988 MCQLSSSTSSVSTLCETNNNQTNISTTKLKKPDMFTPLIPKSPTFKQQETHTKKTHFSLAINEAKHISNIALPMVLTGLLMYSRSIISMLFLGRAGELALAGGSLAIGFANITGYSILSGLAMGMEPICGQAFGAKRFKLLGLTMQRTMILLLVTSIFISFLWLNMKRILLLCGQQEDIANVAQSYILYSLPDLVAQSLLHPLRIYLRSQSITLPLTYSATLSILLHLPINYFLVSVLNLGIKGIALGSVWTNFNLVASLIIYIWVSGTHKKTWNGFSSSCFKGWKSLLNLAIPSCISVCLEWWWYEIMILICGLLINPHATVASMGVLIQTTALIYIFPSSLSFGVSTRVSNELGAENPHKAKLAAIVGLCFSFVLGFSALFFAFSVRNIWASMFTNDPQIIALTSMVLPIIGLCELGNCPQTTVCGVLRGTARPKLGANINLGCFYLVGMPVAVWLSFVAGFDFKGLWFGLLAAQGSCMVTMLFVLFRTNWENQVERAKDLTSSDPSEEDEQEEEKGFVSSCDIKECSNSLV* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4143 534 Pfam MatE 73 233 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Psa2g4143 534 Pfam MatE 294 457 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Psa2g4143 534 PANTHER MULTIDRUG RESISTANCE PROTEIN 42 514 - -
Psa2g4143 534 PANTHER PROTEIN DETOXIFICATION 42 514 - -
Psa2g4143 534 CDD MATE_eukaryotic 63 499 IPR045069 GO:0042910|GO:1990961
Psa2g4143 534 TIGRFAM matE: MATE efflux family protein 73 470 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Psa2g4143 534 MobiDBLite consensus disorder prediction 500 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4143 Psa-Chr2 420967631 420969864 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4143 K03327 - gmx:100811560 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4143 2 420967631 420969864 Psa2g4143 2 420967631 420969864 ECH