Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4139 ATGATGAGAGGTTCGAAGCGTTTCGCCGTATCGGAACCAAACCAGACTAATACCACCGAAACGACGTTTCGGAATAAAAGAATAATGGAAGGATCTCTCTTTGATGTCCATAGGGCCGAACCATCCCAACAATTGATGATGGCAACACCCCCATTGGATATGAAACGGGCAGGGTCTTCCCAGCAGCATGTGAGAGCTTTAAATACCCAGTTTGCGAGCTGGGTTCAAACACAATTAAAGAATCACCCTGATGAGATTTGGGAAGATGGTGTCAGAGATTACTTAGATCATGCTACAGGCATTATGGAAAAATTTAGTGATGTTGTCAACTGGCTCAAAACAAATGCCTCCAACAACCAACAACAACAACAACAACAACAACCACCAAGCCTTATCCCACTAAATGGGGTTGGCCTCAAAGCAAATGCCACCAAGGCAGAAATTTCTACTTCTGGTGCTGGTGCCGGTGCTTCTTTTGCTGGGGCCACCAAGGCAGAAATTTCTACTTCCGGTGCTGGTGCCGGTGCTTCTTTTGCTGGGGCCACCAAGGCAGAAATTTCTACTTCCGGTGCTGGTGCCGGTGCTTCTTTTGCTGGGGCCACCAAGGCAGAAATTTCTACTTCCGGTGCTGGTGCCGGTGCTTCTTTTGCTGGGAAAATGTTTTTGCCCGAAGTAACAAACAAAGAAAATAAGATTTTTGGAGAAAAAACTGAATCTCCTCCTGTCAATACTACTACAAGTTTTGGTAGTTCATGGAGCCCTGGAGTATTTTCAAACAATCAAAACATTTTTGCCTTCGGAAATCAAAGTTCTGCCCCTTCCAACTCCAATCCTTCCAACTCCAATCACAACGCTTCAGATGACGTGGATGCTGAAAATGACGAAGAGCAGCCCAGCAGCCCATCAGTGAAGAAGTCAGAAGAGACCGGTGTTGCAGTTGTACATGAAGTGAAGTGCAAGCTTTATGTGAAGTCAAGTGATCCAACCGATAAGGATGTATGGAAAGATAGAGGAATGGGCCATTTGTCCATTAAATGCAAAGAGGGGGTTGCTAAGGCTACAAAAGAGTCCAAACCTACAATCATTGTTCGAAACGAGGTAGGAAAAATTCTTCTCAATGCCTTGTTGTATCCTGGAATCAAGACAAGTGCACAAAAGAACTCCCTTGTTGCGATATTTCATACTTCGGGTAATGATGATGGTGGAGATAATGATAGTGTTGTTGCACGAACATTTTTGATCCGGATGAAAACAGAAGATGATCGAAATAAACTGGCTTCAACTATTCAAGAATATGCTCCAGTATCTTGA 1311 0.4409 MMRGSKRFAVSEPNQTNTTETTFRNKRIMEGSLFDVHRAEPSQQLMMATPPLDMKRAGSSQQHVRALNTQFASWVQTQLKNHPDEIWEDGVRDYLDHATGIMEKFSDVVNWLKTNASNNQQQQQQQQPPSLIPLNGVGLKANATKAEISTSGAGAGASFAGATKAEISTSGAGAGASFAGATKAEISTSGAGAGASFAGATKAEISTSGAGAGASFAGKMFLPEVTNKENKIFGEKTESPPVNTTTSFGSSWSPGVFSNNQNIFAFGNQSSAPSNSNPSNSNHNASDDVDAENDEEQPSSPSVKKSEETGVAVVHEVKCKLYVKSSDPTDKDVWKDRGMGHLSIKCKEGVAKATKESKPTIIVRNEVGKILLNALLYPGIKTSAQKNSLVAIFHTSGNDDGGDNDSVVARTFLIRMKTEDDRNKLASTIQEYAPVS* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4139 436 CDD RanBD_NUP50 307 433 - -
Psa2g4139 436 Pfam RanBP1 domain 303 431 IPR000156 GO:0046907
Psa2g4139 436 MobiDBLite consensus disorder prediction 270 309 - -
Psa2g4139 436 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP50 14 434 - -
Psa2g4139 436 MobiDBLite consensus disorder prediction 1 20 - -
Psa2g4139 436 PANTHER RAN BINDING PROTEIN 14 434 IPR045255 -
Psa2g4139 436 Gene3D - 223 435 IPR011993 -
Psa2g4139 436 MobiDBLite consensus disorder prediction 270 286 - -
Psa2g4139 436 ProSiteProfiles Ran binding domain type 1 profile. 305 431 IPR000156 GO:0046907
Psa2g4139 436 SUPERFAMILY PH domain-like 305 433 - -
Psa2g4139 436 SMART ranbd_3 295 432 IPR000156 GO:0046907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4139 K14295 - jre:109011569 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4139 2 420609092 420617293 Psa2g4139 2 420609092 420617293 ECH