Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4135 ATGGGTCTAGGTTTTTGGTTATGGAGGCTAACTCTTCTTTCTGCCATTTTCTTCTCTCCTAATCAGTGCACATGTCAAAAAGATGCAGGTAGAAAATATCCATTTATGCAAAATGCTGCATCAGCACCAAGTGTATCATACTATGATTACATCATAATTGGTGGAGGAACTGCAGGGTGTCCTTTAGCTGCGACGCTGTCCCAAAACCACACTGTTTTGGTGCTTGAACGTGGTGGATCACCTTATGGAAACCCTAATATAACAAACTTAAGTGCCTTTGGTGTTCCACTTTCTGATACTTCTCCTTCCTCTCCTGCTCAACGCTTTACTTCTGAAGATGGCGTTGTCAACTCAAGAGCTCGTGTTCTTGGCGGTGGATCGTGTTTGAATGCTGGTTTCTATACTCGAGCAAGTCCTCATTACGTAAGAGAAGTTGGTTGGGATGGAAAGCTGGTGAATGAGTCATATAGATGGGTGGAGAGAGTGGTGGCGTTTCAACCTCCTATGCGACAATGGCAATCGGCGGTTAGGGATGGATTGATAGAAGTAGGGGTGTTGCCCTACAATGGTTTTACTTATGATCATGTTTATGGGACTAAGGTTGGAGGTTCAATTTTTGACCAAAATGGTCATAGACATACTGCAGCTGATCTTCTGGAATATGCTAACACAAACACAATGACTCTTCTTTTGCATGCCATTGTTCATAGGATCTTGTTTATAACTAATAACAAAGGTGGATCAAGTTCGAGGCCAGTCGCACATGGAGTTGTATTCAAGGATGAACATGGAAGAGAACACATGGCATACTTGAAACAAGGCAGTAGAAATGAGATCATTGTGTCAGCCGGAGCACTAGGTAGCCCACAACTTCTAATGTTGAGTGGAATTGGAGCAGCACATCATCTTAGGGAACACAACATCAGTGTAGTATTGGATCAACCTTTGGTTGGACAAGGAATGTCTGATAACCCAATGAACGCAATTTTTGTCCCGTCTCCTGCTCCGGTCGAGGTCTCCCTCATTCAAGTCGTTGGCATTACCGACTTTGGAAGCTACATTGAAGCCGCTAGTGGTGAAAACTTCAACCACCGTTCTCGAAGAGACTTCGGAATGTTTTCTCCTAAGATTGGACAATTTTCAAAGTTGCCACCAAAGCAAAGGACACCAGAAGCCATAGAAAAAGCAATAGAGAGAATGGAGAGCCTGGACCAAGATGCTTTCAAAGGTGGATTCATTCTAGAAAAGATAATGGGACCAATTTCAAGAGGTCATTTAGAGCTTCAAAACACTGATCCAAATGAGAACCCTATAGTAACCTTCAACTACTTCCAAGATCCAAGAGACTTAGAAATGTGCATACAAGGAATCAACACCATTGAGAGAATAATAAGCTCAAAGGCTTTTTCACCATTTAAATACGATAATATGCCAGTTTCTATGTTACTTAACATGACAGCAAATTCGCCGGTAAATTTATTGCCTAAACACACAAATACATCAATGTCTTTGGCACAATTTTGTAGAGACACTGTCATGACTATATGGCATTATCATGGTGGATGCCAAGTCGGAAGGGTTGTTGATACTGATTATAAGGTTCTTGGCGTTGACGCATTGCGCGTGATCGACGGTTCTACGTTTAATTATTCTCCTGGAACTAATCCTCAAGCAACTGTTATGATGCTTGGAAGGTATATGGGAGTCAAAATATTGACAGAGAGACTTGTTGCTGATGAAACCAAATAA 1749 0.418 MGLGFWLWRLTLLSAIFFSPNQCTCQKDAGRKYPFMQNAASAPSVSYYDYIIIGGGTAGCPLAATLSQNHTVLVLERGGSPYGNPNITNLSAFGVPLSDTSPSSPAQRFTSEDGVVNSRARVLGGGSCLNAGFYTRASPHYVREVGWDGKLVNESYRWVERVVAFQPPMRQWQSAVRDGLIEVGVLPYNGFTYDHVYGTKVGGSIFDQNGHRHTAADLLEYANTNTMTLLLHAIVHRILFITNNKGGSSSRPVAHGVVFKDEHGREHMAYLKQGSRNEIIVSAGALGSPQLLMLSGIGAAHHLREHNISVVLDQPLVGQGMSDNPMNAIFVPSPAPVEVSLIQVVGITDFGSYIEAASGENFNHRSRRDFGMFSPKIGQFSKLPPKQRTPEAIEKAIERMESLDQDAFKGGFILEKIMGPISRGHLELQNTDPNENPIVTFNYFQDPRDLEMCIQGINTIERIISSKAFSPFKYDNMPVSMLLNMTANSPVNLLPKHTNTSMSLAQFCRDTVMTIWHYHGGCQVGRVVDTDYKVLGVDALRVIDGSTFNYSPGTNPQATVMMLGRYMGVKILTERLVADETK* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4135 582 Pfam GMC oxidoreductase 48 325 IPR000172 GO:0016614|GO:0050660
Psa2g4135 582 Gene3D - 48 564 IPR036188 -
Psa2g4135 582 Pfam GMC oxidoreductase 420 565 IPR007867 GO:0016614
Psa2g4135 582 PIRSF Alcohol_oxidase 26 581 IPR012132 GO:0050660
Psa2g4135 582 SUPERFAMILY FAD-linked reductases, C-terminal domain 321 521 - -
Psa2g4135 582 PANTHER OSJNBA0019K04.7 PROTEIN 18 576 - -
Psa2g4135 582 SUPERFAMILY FAD/NAD(P)-binding domain 47 573 IPR036188 -
Psa2g4135 582 Gene3D - 165 514 - -
Psa2g4135 582 ProSitePatterns GMC oxidoreductases signature 2. 284 298 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4135 Psa-Chr2 420362924 420366186 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g4135 1 580 Miscellaneous Gene Families AT5G51950 57.509 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4135 - - gmx:100796752 901.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4135 2 420362924 420366186 Psa2g4135 2 420362924 420366186 ECH