Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4134 ATGGCCGCAAAGAACGTTGGAATTCTCGCTCTCGACATCTATTTCCCTCCCAACTGCGTTCAACAGGAAGCATTGGAGGTTCATGATGGTGCGAGCAAAGGGAAATATACCATTGGACTTGGACAAGATTGTATGTCGTTTTGTTCCGATGTTGAAGATGTTATCTCAATGAGTTTGACGGTGGTTTCTACCCTTCTTGAGAAGTATGAGATCGATCCTAAACAAATTGGTCGTCTGGAAGTAGGCAGTGAGACTGTGATAGACAAAAGCAAATCCATCAAGTCATTCTTGATGCAGATCTTTGAGAAATATGGAAATACTGACATTGAAGGTGTTGATTCAACTAATGCATGCTATGGAGGAACTGCCGCTTTGTTCAATTGTGTCAATTGGGTGGAGAGCAATTCATGGGATGGACGCTATGGACTTGTTGTCTGCACAGACAGTGCCGTCTATGCTGAAGGTCCTGCTCGACCTACCGGAGGAGCTGCTGCTATTGCCATGCTAATTGGTCCTGATGCTCCTATTTCTTTTGAAAGCAAATTGAGAGGAAGTCATATGGCTCATGTTTATGATTTTTACAAACCTGACCTTGCTAGTGAATATCCGGTTGTCGACGGAAAGCTTTCACAAACATGTTACCTCATGGCCCTTGATACTTGCTATAAAAATTTCTGTCAAAAGTATGAGAAGCACGAGGGAAAGAAATTTTCTCTTTCTGACGTTGGTTACTTTGTATTCCACTCTCCTTATAACAAGCTTGTGCAAAAAAGTTTTGCTCGTTTGGTCTTCAGTGACTTCTTGAGGAATTCCAGCTCTTCTACTGATGAGGTTGCCAAAGAAAAGCTGGGACCTTTTGCAGCTTTATCTGATGAGGACAGCTACCAAAGCCGGGATCTTGAAAAGGCATCCCAACAAGTTGCCAAGCCTCTATTTGATGAGAAGGTACAACCAACTACTTTGATACCAAAGCAAGTCGGCAACATGTACACCGCGTCCCTCTATGCAGCATTTGCATCCCTTATTCACGACAAAAATAGCTCACTGGAAGGTAAGAGGGTGATATTGTTCTCATATGGAAGTGGCCTAACTTCCACAATGTTTTCCTTGCAATTACGTGAAGCTAAACATCCATTTAGCTTGTCAAACATTGCCCGAGTGATGGATGTTGCTGAAAAGTTGAAGTCAAGACAAGAGTTCCCTCCAGAGAAGTTTATTGAAACACTGAAGCTAATGGAGCATAGGTATGGTGCCAAAGATTATGTAACAAGCAAGGACAGTAGCCTTTTATATCCAGGCACATTCTATCTCACCGAAGTTGATACCAAGTATCGCAGATTCTATGCGACAAAATCTAGTGAAAGCAATTTGACAGGAAACGGAGTGAGTGCCAATGGTCACTGA 1404 0.4259 MAAKNVGILALDIYFPPNCVQQEALEVHDGASKGKYTIGLGQDCMSFCSDVEDVISMSLTVVSTLLEKYEIDPKQIGRLEVGSETVIDKSKSIKSFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESNSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPDAPISFESKLRGSHMAHVYDFYKPDLASEYPVVDGKLSQTCYLMALDTCYKNFCQKYEKHEGKKFSLSDVGYFVFHSPYNKLVQKSFARLVFSDFLRNSSSSTDEVAKEKLGPFAALSDEDSYQSRDLEKASQQVAKPLFDEKVQPTTLIPKQVGNMYTASLYAAFASLIHDKNSSLEGKRVILFSYGSGLTSTMFSLQLREAKHPFSLSNIARVMDVAEKLKSRQEFPPEKFIETLKLMEHRYGAKDYVTSKDSSLLYPGTFYLTEVDTKYRRFYATKSSESNLTGNGVSANGH* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4134 467 Pfam Hydroxymethylglutaryl-coenzyme A synthase C terminal 176 451 IPR013746 GO:0004421|GO:0006084|GO:0010142
Psa2g4134 467 SUPERFAMILY Thiolase-like 5 173 IPR016039 GO:0016746
Psa2g4134 467 Gene3D - 1 452 IPR016039 GO:0016746
Psa2g4134 467 PANTHER 3-HYDROXY-3-METHYLGLUTARYL COENZYME A SYNTHASE 1 459 - -
Psa2g4134 467 CDD init_cond_enzymes 5 370 - -
Psa2g4134 467 SUPERFAMILY Thiolase-like 177 449 IPR016039 GO:0016746
Psa2g4134 467 Pfam Hydroxymethylglutaryl-coenzyme A synthase N terminal 3 175 IPR013528 -
Psa2g4134 467 ProSitePatterns Hydroxymethylglutaryl-coenzyme A synthase active site. 106 121 IPR000590 GO:0004421|GO:0008299
Psa2g4134 467 TIGRFAM HMG-CoA-S_euk: hydroxymethylglutaryl-CoA synthase 3 451 IPR010122 GO:0004421|GO:0008299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4134 K01641 - gmx:100782595 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4134 2 420337476 420342340 Psa2g4134 2 420337476 420342340 ECH