Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4108 ATGTCCACCTCCTCTCAAGCTACTACTACTAACAGAAATGCTAACAGAAACTCTCTTAAACCGTCGTCAAATGTCAAGTCTAAGCCTATTCAACGCCGTAATACCACCGCCTCCGCCGTCAAGGATCACACCACCGTGAGTGAAGTTCCTGGAAGAGTTAGAGTTGCGGTTAGGTTGCGGCCGAGGAATGCTGAGGAATCAGTGGCGGATGCTGATTTTGCTGACTGTGTTGAATTACAGCCAGAGCTCAAAAGGTTAAAACTAAGGAAGAATAATTGGGATGGAGAGACTTATGAATTTGATGAGGTGCTTACTGAATTTGCGTCGCAAAAACGAGTTTATGAAGTTGTGGCTAGGCCTGTTGTGGAGAGTGTACTGGATGGCTACAATGGAACAATCATGGCATATGGCCAGACTGGTACTGGTAAGACTTATACTCTTGGAAGACTTGGGGAGGAAGACACAGCTGCACGTGGAATAATGGTACGAGCTATGGAAGATATTTTTGCAGATGTTTCCTTGGAAAGTGATTCTGTCTCAGTCTCATATTTACAGCTATATATGGAGACTATACAGGATCTGCTCGACCCTTCCAATGATAACATAGCCATTGTAGAAGATCCCAAAACTAATGATGTTTCACTACCTGGAGCTACTTTAGTCGAGATTAGGGACCAACAGAGTTTTATTGAATTACTAAGATTAGGAGAGGCTCACCGCTTTGCTGCAAATACAAAACTGAATACCGAATCTTCTAGAAGTCATGCTATTTTGATGGTGCATGTAAAGAGATCCGTCAAGGGAAGAGATGCTTCTCATTCAAGTGAAAATGGAAATCATCCACACATGGTTAAATCGTTAAAGCCGCCTATTGTTCGGAAAGCTAAGTTGGTTGTTGTAGATCTTGCTGGTTCAGAACGAATTGACAAATCAGGAAGTGAAGGACATATGCTAGAGGAAGCCAAATCCATCAATCTGTCTTTAAGTGCATTGGGGAAATGTATTAATTCACTTGCAGAGAATAGTGCACATGTGCCATTCCGTGACTCAAAGCTTACTAGATTATTACGTGATTCATTTGGAGGTACAGCAAGAACTTCACTTGTGATTACTATTGGACCGTCACCACGTCATAGGGGAGAGACGGCCAGTACTATAATGTTTGGACAGAGGGCTATGAAGGTGGAAAACATGATAAAGTTAAAAGAGGAATTTGATTACAAAAGCTTATCAAGAAGGCTAGACATAGAACTAGATAAACTCATTATGGAACATGAAAGACAGCAAAAGGCATTTGAGGATGAAATTGAAAGGTTAGCAACAGAAGCACAGCATCGGATATCTGAGGCTGAAAGAAACTATGTAGACTCACTGGAGAAGGAAAGATCAAAGTATCAGAAGGACTATATGGAGTCAATTAGGAAGCTTGAAGAGAAGTTTGTGATGAATCAACGGAAGAACGAGGAGCCTCATATGAAATCAAACACAGAGATTCCCAACGTATCTTCCGAGGAAATGGCTGATTTGAAGAAAATGCTTCAAAAAGAGACTCTTTTAAGAAAAGCTGCTGAAGGGGAAACAAATAATTTGAAGATTCAAGTGGCGGAACTAAGACAGTCAGAGGCATCAGCAAAGACAGAGATATCAAAACTTTATAAGATTTTGGAAGAGGAGTCTCACCAGAAAGAGAAGCTTGAAGGAGAAATAGCAATATTACAAAGTCAGTTGTTGCAGTTAGGTCTTGAAGCTGATGAGACAAGACGACATCTAGATAGGGGTGGTGGATTTAGCAAAGAAGTGGGTGCTCGTGATTCTCTCACTTCCCAAATTAAGCATCAGCAGCAAGTTTCAGGAAACGGGGAGAAGCCTTCAATAGCCAAGCTCTTTGAGCAAGTGGGATTGCAGAAGATTTTGTCATTGCTTGAATCAGAAGATGCTGATGTGCGAATCCATGCTGTAAAAGTTGTAGCAAATCTCGCTGCTGAAGAAACAAATCAAGGAAAGATTGTAGAAGCGGGGGGGCTTACTTCCTTGCTTATGCTGCTTAAGACCACACAAGATGAGACCATACATAGAGTTGCTGCAGGGGCTATTGCAAATTTGGCAATGAATGAAACCAACCAAGAACTCATAATGGCCCAAGGGGGCATTAGTTTGCTGTCAATGACTGCAGCCAATGCTGAAGATCCTCAAACTCTGCGAATGGTTGCTGGGGCCATTGCTAATCTCTGCGGCAATGATAAACTGCAAACAGAATTAAGGGGCGAAGGTGGTATCAAGGCACTGCTGGGAATGGTGAGATGCAGGCATCCTGATGTGCATGCACAGGTTGCTCGAGGAATAGCAAATTTCGCAAAGTGCGAGTCAAGAGCGTCGAGTCAAGGGATGAAGAGTGGAAGATCTTTCCTCATTGAGGATGGTGCCCTTCCGTGGATTGTTCAAAATGCAAACAACGAAGCCTCGTCAATAAGGCGTCATATTGAACTCGCACTCTGTCACTTAGCACAACACGAAGCAAATGCAAGAGACATGATTAGTGGGGGTGCATTATGGGAGCTAGTTCGTATCTCACGAGATTGTTCCAGAGAAGACATAAAGACTCTAGCACATCGAACACTAGCCTCCAGCCCCGCTTTCCAAGCTGAAATGAGGCGTTTGCGATTGAGCCACTGA 2673 0.4299 MSTSSQATTTNRNANRNSLKPSSNVKSKPIQRRNTTASAVKDHTTVSEVPGRVRVAVRLRPRNAEESVADADFADCVELQPELKRLKLRKNNWDGETYEFDEVLTEFASQKRVYEVVARPVVESVLDGYNGTIMAYGQTGTGKTYTLGRLGEEDTAARGIMVRAMEDIFADVSLESDSVSVSYLQLYMETIQDLLDPSNDNIAIVEDPKTNDVSLPGATLVEIRDQQSFIELLRLGEAHRFAANTKLNTESSRSHAILMVHVKRSVKGRDASHSSENGNHPHMVKSLKPPIVRKAKLVVVDLAGSERIDKSGSEGHMLEEAKSINLSLSALGKCINSLAENSAHVPFRDSKLTRLLRDSFGGTARTSLVITIGPSPRHRGETASTIMFGQRAMKVENMIKLKEEFDYKSLSRRLDIELDKLIMEHERQQKAFEDEIERLATEAQHRISEAERNYVDSLEKERSKYQKDYMESIRKLEEKFVMNQRKNEEPHMKSNTEIPNVSSEEMADLKKMLQKETLLRKAAEGETNNLKIQVAELRQSEASAKTEISKLYKILEEESHQKEKLEGEIAILQSQLLQLGLEADETRRHLDRGGGFSKEVGARDSLTSQIKHQQQVSGNGEKPSIAKLFEQVGLQKILSLLESEDADVRIHAVKVVANLAAEETNQGKIVEAGGLTSLLMLLKTTQDETIHRVAAGAIANLAMNETNQELIMAQGGISLLSMTAANAEDPQTLRMVAGAIANLCGNDKLQTELRGEGGIKALLGMVRCRHPDVHAQVARGIANFAKCESRASSQGMKSGRSFLIEDGALPWIVQNANNEASSIRRHIELALCHLAQHEANARDMISGGALWELVRISRDCSREDIKTLAHRTLASSPAFQAEMRRLRLSH* 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4108 890 Coils Coil 506 540 - -
Psa2g4108 890 Gene3D Kinesin motor domain 43 425 IPR036961 -
Psa2g4108 890 Gene3D - 725 885 IPR011989 -
Psa2g4108 890 ProSiteProfiles Kinesin motor domain profile. 52 395 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa2g4108 890 SMART kinesin_4 50 403 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa2g4108 890 PANTHER KINESIN-LIKE PROTEIN KIN-UA 37 882 IPR033291 GO:0008017|GO:0032886|GO:0048364
Psa2g4108 890 MobiDBLite consensus disorder prediction 1 43 - -
Psa2g4108 890 SUPERFAMILY ARM repeat 621 874 IPR016024 -
Psa2g4108 890 ProSitePatterns Kinesin motor domain signature. 295 306 IPR019821 GO:0003777|GO:0005524|GO:0007018
Psa2g4108 890 PRINTS Kinesin heavy chain signature 128 149 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa2g4108 890 PRINTS Kinesin heavy chain signature 296 314 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa2g4108 890 PRINTS Kinesin heavy chain signature 345 366 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa2g4108 890 MobiDBLite consensus disorder prediction 1 46 - -
Psa2g4108 890 Coils Coil 548 582 - -
Psa2g4108 890 Gene3D - 540 724 IPR011989 -
Psa2g4108 890 Pfam Kinesin motor domain 58 395 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa2g4108 890 Pfam Armadillo/beta-catenin-like repeat 669 702 IPR000225 GO:0005515
Psa2g4108 890 SMART arm_5 746 786 IPR000225 GO:0005515
Psa2g4108 890 SMART arm_5 662 703 IPR000225 GO:0005515
Psa2g4108 890 SMART arm_5 704 745 IPR000225 GO:0005515
Psa2g4108 890 SMART arm_5 622 661 IPR000225 GO:0005515
Psa2g4108 890 Coils Coil 422 475 - -
Psa2g4108 890 CDD KISc 52 393 - -
Psa2g4108 890 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 673 716 IPR000225 GO:0005515
Psa2g4108 890 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 430 IPR027417 -
Psa2g4108 890 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 632 674 IPR000225 GO:0005515
Psa2g4108 890 PANTHER KINESIN-RELATED 37 882 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4108 Psa-Chr2 419402048 419410175 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g4108 53 421 Miscellaneous Gene Families AT2G21380 34.190 7.56e-46 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4108 - K10396 gmx:100804612 1498.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4108 2 419402048 419410175 Psa2g4108 2 419402048 419410175 ECH