Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4103 ATGTCACCAGCATGTAAATTAGGAGACAACCTTAGCTCAAACCTTAAAACAAACATGCTATCAGAGGAGCTAAGAGTTCAAGGAAGGTTGGCCTCTCCAATGGTGTTGATGAATTTAGCTTGGTTTGCCAAAACAGCTATCACAACAGCATTTTTGGGCCGACTCGGTGAGCTCAGCTTGGCGGGCGGTGCACTCGGGTTCACTTTTGCCAACGTTACTGGCTTCTCAGTCTTGAATGGTTTGTCTGGTGCCATGGAGCCTATATGTGGACAGGCTCATGGTGCTAAAAACGTGAGACTCCTTCACAAGACTCTTCTCATGACAATTATATTGTTGCTGTTGGTAACAATTCCTGTTACTTTCATGTGGCTTCATATTGACAAAATTTTGATTCATTTTGGACAACAACAAGAGATATCAACTGTGGCTGGAACTTTTGTTTATTATCTCGTACCTGATTTGTTTGTTATGTCATTCTTGTGTCCCTTAAAAGCTTATTTGAGTTCTCAAAGTATCACTCTTCCAACCATGTTTAGTTCTGGTGTAGCACTCGCTTTTCATGTTCCTGTTAACATCGTACTCTCGAAAACCATGGGTTTAAAAGGAGTTTCCATGGCTGTCTGGATAACTGACCTTATTGTTGTGGCTCTTCTGGCTATTTATGTTGTGATTCTGGAGAATCGAATGGAGACTGCGTGGAAGGAAGGAGGATGGTGGGATCAGAGTTTTATGGATTGGATTAGGCTGATCAAGCTCTGTGGATCTTGTTGTCTTAACACATGTATGGAGTGGTGGTGCTATGAGATTCTGGTTTTGCTTACTGGCCACCTCGCAAACGCTAAGCAAGCATTGGGAGTTTTAACCATTGTGTTAAACTTCGACTATTTGCTTTTCTCAGTGATGTTGTCATTGGCCACTTGTGTTTCAACTCGTGTCTCGAACGAGCTTGGTGCGAATGAAGCTGACCGCGCTTACCGATCTGCGCGTGTGTCTCTAGGAATAGGTTTTATCGCGGGGTGCACTGGAAGCTTGGTGATGGTGGCAGCAAGGGGAGTATGGGGGCAAGTTTTCAGCCATGATAGGGGAATTATAAAAGGAGTGAAGAAGACGATGTTGTTGATGGCTCTAGTGGAATTGTTTAATTTTCCATTGGCAGTTTGTGGAGGCATAGTTCGAGGGACAGCTCGACCTTGGTTGGGTATGTATGCTAGTCTAGGTGGGTTTTATTTCTTGGCTCTGCCCCTTGGTGTTGTTTTTGCCTTCAAGCTTCGTCTTGGCCTTGTTGGACTCTTCTTTGGACTTCTTACTGGTATTGTAGCTTGCTTGTCGCTTTTGTTAGTTTTTATTGCTAGGATAAAGTGGGTGGAAGAAGCTGCCAAGGCACAAATATTAACAAGTTACGGTGTCAAAGAAGTTGCATGTAATGTGGCAGAAATACAAATTGGGGCTGGTGAAAACGACAAAGTGTAA 1470 0.4354 MSPACKLGDNLSSNLKTNMLSEELRVQGRLASPMVLMNLAWFAKTAITTAFLGRLGELSLAGGALGFTFANVTGFSVLNGLSGAMEPICGQAHGAKNVRLLHKTLLMTIILLLLVTIPVTFMWLHIDKILIHFGQQQEISTVAGTFVYYLVPDLFVMSFLCPLKAYLSSQSITLPTMFSSGVALAFHVPVNIVLSKTMGLKGVSMAVWITDLIVVALLAIYVVILENRMETAWKEGGWWDQSFMDWIRLIKLCGSCCLNTCMEWWCYEILVLLTGHLANAKQALGVLTIVLNFDYLLFSVMLSLATCVSTRVSNELGANEADRAYRSARVSLGIGFIAGCTGSLVMVAARGVWGQVFSHDRGIIKGVKKTMLLMALVELFNFPLAVCGGIVRGTARPWLGMYASLGGFYFLALPLGVVFAFKLRLGLVGLFFGLLTGIVACLSLLLVFIARIKWVEEAAKAQILTSYGVKEVACNVAEIQIGAGENDKV* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4103 489 CDD MATE_eukaryotic 23 460 IPR045069 GO:0042910|GO:1990961
Psa2g4103 489 PANTHER MULTIDRUG RESISTANCE PROTEIN 16 470 - -
Psa2g4103 489 Pfam MatE 256 417 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Psa2g4103 489 Pfam MatE 33 192 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Psa2g4103 489 PANTHER PROTEIN DETOXIFICATION 56 16 470 - -
Psa2g4103 489 TIGRFAM matE: MATE efflux family protein 33 430 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4103 Psa-Chr2 419145556 419147025 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4103 K03327 - gmx:100804083 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4103 2 419145556 419147025 Psa2g4103 2 419145556 419147025 ECH