Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4102 ATGGCTACTACGCACTACCATTGCTCCTCAAGCTTGGTATTGCGTTCAAACCCTTCGATCCATTTGGTTCACAATTCGAAGCTAACAAACCCCAACAATTCATGGCTAGGAGCCAAAATTAGGGTTCAACCTCTCAGTGTAAGACCTCCCGTGTCCGTTTTACACCGCCGGCCCGTCGCCGTCGCCGCTTCCGTTTCCTTCAGCCTCCCCACCCCAAATCCAGAGCGTGTTTCTCCTGGCCAGGAAATTCCCAAATGGTCTTCTAAGGCTGTAAAGTCATTTGCAATGGCTGCAGTGGAGGCGAGGAAACTCAAGTTTACTACTACGGGAACTGAAGCCCTTCTCATGGGGGTTCTTGTTGAGGGCACTAATCTGGCTAACAAGTTTTTGCGAGCCAACGGAATTACACTTTTCAAGGTCCGAGATGAAATTGTGAACGTGCTTGGAATAGCTGATATGTTTTCACTATCCCCTGAGCGTCCTCCAATCACTGATGATGCTCTGAGGGCCCTTGACTGGGCTCTTGAAAAAAAATTAAAATCAGGCGATGGCGGGGAAATAACCACAGCACACATAATTCTTGGCATTTGGTCTGAAGAGCATTCCCCTGGTCACACGATACTTTCCAACCTTGGCTTTAATGATGAAAAAGCTAAAGAGCTGGAGTCCTCTATTTCTAAAGCTGCTGCTAATGATGAATAA 702 0.4729 MATTHYHCSSSLVLRSNPSIHLVHNSKLTNPNNSWLGAKIRVQPLSVRPPVSVLHRRPVAVAASVSFSLPTPNPERVSPGQEIPKWSSKAVKSFAMAAVEARKLKFTTTGTEALLMGVLVEGTNLANKFLRANGITLFKVRDEIVNVLGIADMFSLSPERPPITDDALRALDWALEKKLKSGDGGEITTAHIILGIWSEEHSPGHTILSNLGFNDEKAKELESSISKAAANDE* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4102 233 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 5 232 IPR044217 -
Psa2g4102 233 Gene3D - 85 233 IPR036628 -
Psa2g4102 233 Pfam Clp amino terminal domain, pathogenicity island component 186 225 IPR004176 -
Psa2g4102 233 Pfam Clp amino terminal domain, pathogenicity island component 97 149 IPR004176 -
Psa2g4102 233 SUPERFAMILY Double Clp-N motif 85 218 IPR036628 -
Psa2g4102 233 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT2, CHLOROPLASTIC 5 232 - -
Psa2g4102 233 ProSiteProfiles Clp repeat (R) domain profile. 83 228 IPR004176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4102 Psa-Chr2 419140243 419147311 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4102 - - cam:101488253 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4102 2 419140243 419147311 Psa2g4102 2 419140243 419147311 ECH