Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4101 ATGGAGTGGCCTGCTTGTACGGATGAATATGAGAAGCTCTTAATAAGGATGAGCACACCAAGGGTTGTTATTGACAATGCCGTGTGCTCTACTGCTACTATAGTCAAGGTTATTAGTGCAAGAAGACATGGTAGTTTACTTGATGCAATTCAAATTCTCATTGATCTGAACCTTGTAATTAAGAAAGCTTATATATCCTCGGATGGAAAATGGTTTATGGATGTTTTCCACGTCGTTGATCGAAACGGAAACAAGCTAATCGACGAGAGCGTTTTAAAATACATAGAACAGTCGCTTGGGAGTGTTCACAATGTGAGGACTAGTTGCTCGAACGGTCTCACTGCGCTTGAATTATCGGGAACCGATAGAGTTGGTCTTCTATCGGAGGTTTTTGCGGTACTTGCTGATCTTCAATGTGATGTTGTTGAAGCTAAGGTTTGGACTCACAATGGCCGCATTGCTTCTTTGATCTATGTTAAAGACTGCGATTCCGGAGCCACTATTGATGATTCTCAAAAGATTAAAAAGATTGAAGTTCGTTTAAGAAACGTTTTGAAGGGAGACAATGACATTAGAACTGCTAAAACTTCTGTCTCTATGTCTGTCATGCATAGTGAAAGAAGATTGCATCAAATGATGTTCGCTGATCGTGACTACGAGAGGACTCCGATTCTGAAGCTCATTTCCAATGATACTGTAGTAACTGTCCAGAACTGGGCGGAAAGGGGTTATTCAGTTGTGAATGTTCAGTGCAAGGATCGAATCAAACTACTATTTGATGTCGTATGCAATTTGACAGACATGGAGTATGTCGTGTTTCACGCAACCATCAACACGAATAGTAACCAAGCTTACTTGGAGTTTTACATACGACACAACGACGGCACACCAATTAGTTCAGAACCAGAGCGACAACGCGTAATTCAATGTTTAAAAGCTTCTGTGGAGAGAAGGGCATCTGAGGGTGTTCAACTAGAGTTATGCACAGAAGACAAAAAAGGACTTCTAGCAGAAGTGATGAGAACCTTCAGAGAAAATGGACTTAATGTTACAAGAGCTGAAATATCCACCATAGGAAAAATGGCTACAAATGTTTTCTATGTAACAGACGTGATTGGAAACCAAGCCGATCCAAAAGTCATAGAGTCTGTTAGGCAGAAAATTGGGTCAAGCAATTTAGAAGTGAAGGAGTTACCATTGATATATCATGAGAAGGCAGAAAGAGAGGATCAATCAGGTGGAATTGGTGGTGCAGTGCTGTGGTCTATTGGGAGTCTTGTGAGAAAAAATCTGTATAGTTTAGGATTAATTAAATCATGTTCTTAA 1326 0.4027 MEWPACTDEYEKLLIRMSTPRVVIDNAVCSTATIVKVISARRHGSLLDAIQILIDLNLVIKKAYISSDGKWFMDVFHVVDRNGNKLIDESVLKYIEQSLGSVHNVRTSCSNGLTALELSGTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCDSGATIDDSQKIKKIEVRLRNVLKGDNDIRTAKTSVSMSVMHSERRLHQMMFADRDYERTPILKLISNDTVVTVQNWAERGYSVVNVQCKDRIKLLFDVVCNLTDMEYVVFHATINTNSNQAYLEFYIRHNDGTPISSEPERQRVIQCLKASVERRASEGVQLELCTEDKKGLLAEVMRTFRENGLNVTRAEISTIGKMATNVFYVTDVIGNQADPKVIESVRQKIGSSNLEVKELPLIYHEKAEREDQSGGIGGAVLWSIGSLVRKNLYSLGLIKSCS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4101 441 ProSiteProfiles ACT domain profile. 115 192 IPR002912 -
Psa2g4101 441 SUPERFAMILY ACT-like 111 172 IPR045865 -
Psa2g4101 441 CDD ACT_ACR_3 244 318 - -
Psa2g4101 441 Pfam ACT domain 325 375 IPR002912 -
Psa2g4101 441 Pfam ACT domain 115 165 IPR002912 -
Psa2g4101 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 439 IPR040217 -
Psa2g4101 441 CDD ACT_ACR_2 114 187 - -
Psa2g4101 441 SUPERFAMILY ACT-like 29 104 IPR045865 -
Psa2g4101 441 PANTHER [PROTEIN-PII] URIDYLYLTRANSFERASE-RELATED 1 439 - -
Psa2g4101 441 SUPERFAMILY ACT-like 320 388 IPR045865 -
Psa2g4101 441 ProSiteProfiles ACT domain profile. 324 403 IPR002912 -
Psa2g4101 441 Gene3D - 113 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4101 Psa-Chr2 419061717 419063872 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4101 - - lja:Lj2g3v2002690.1 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4101 2 419061717 419063872 Psa2g4101 2 419061717 419063872 ECH