Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4086 ATGGATACCAAAAACACTTTACCATCAACACCTGGTAAATTAAAACCAGAAAAATATTACCCACCTTACAATATCCATCGCATTAGATTATCAAAACTCACACTATACTCTTCAATCTTCCTCGCTTTCATCATTTTCTTCTTCATTCTCTCACCTCCTTCCCCTTCCCCTTCATCACTCCGTACTCACAACCCATGGGGCGGACCCGATTGGGAAAAACGGGTCACTAAATCCGCCCGTCGGAGCTCCGCTTCATCCCTCACTGTTCTTGTCACCGGTGCTTCCGGTTTCGTCGGTACTCACGTCTCACTTGCTCTTAAACGACGTGGAGATGGTGTCATCGGTCTTGACAATTTCAACCGCTATTATGACCCCAACCTCAAACGCGCCCGTCAGAAAGTACTCTCACGCGCCGGTGTTTTCGTCGTTGAAGGTGACATCAACGATGCGAATCTCCTTCATAAACTCTTCGATGTTGTTCCTTTTACACACGTCATGCATCTCGCTGCTCAAGCTGGGGTTCGTTACGCTATGCAAAACCCTAATTCGTATATTCATAGCAACATTGCAGGTTTTGTTAGTCTTCTAGAAGCTTCTAAGTCTGCGAATCCTCAACCTGCGATTGTTTACGCTTCATCGAGTTCGGTTTACGGTTTGAATTCGAAGGTTCCGTTTTCTGAAAAGGATCGGACTGATCAACCGGCGAGTCTGTATGCAGCTACGAAGAAAGCTGGTGAAGAAATTGCGCATGCTTATAATCATATCTATGGTCTTTCGGTTACTGGCTTGCGTTTCTTCACTGTTTATGGTCCTTGGGGTCGTCCTGATATGGCTTATTTCTTTTTTACTAAGGATATTTTGAAAGGGAAACAGATTACGGTGTTTGAATCACCGGATGGTGGAAGTGTTGCTAGAGATTTTACCTACATTGATGATATTGTGAAGGGGTGTTTAGGGGCTTTGGATACAGCTAAGAGAAGTACTGGTGTTGATGGGAAGAAGAAGGGAAATGCACAGTATAGGATTTTTAATTTGGGTAATACTGCGCCTGTTCCGGTTACGGAGCTTGTTAATATATTGGAGAAGCTTTTGAATGTGAAGGTAAAGAGGAAGGTGATGCCGATGCCGAGAAATGGGGATGTTAAGTTTACTCATGCTAATATAAGTAGGGCTCAAAAGGAGCTTGGATACATGCCTACTACTGATTTGGAAGGTGGACTCAAGAAGTTTGTGAGGTGGTACCTTGACTTTTACTCTCCTTTAAAGAACAAAAGTGTTTGGTGA 1284 0.4369 MDTKNTLPSTPGKLKPEKYYPPYNIHRIRLSKLTLYSSIFLAFIIFFFILSPPSPSPSSLRTHNPWGGPDWEKRVTKSARRSSASSLTVLVTGASGFVGTHVSLALKRRGDGVIGLDNFNRYYDPNLKRARQKVLSRAGVFVVEGDINDANLLHKLFDVVPFTHVMHLAAQAGVRYAMQNPNSYIHSNIAGFVSLLEASKSANPQPAIVYASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGEEIAHAYNHIYGLSVTGLRFFTVYGPWGRPDMAYFFFTKDILKGKQITVFESPDGGSVARDFTYIDDIVKGCLGALDTAKRSTGVDGKKKGNAQYRIFNLGNTAPVPVTELVNILEKLLNVKVKRKVMPMPRNGDVKFTHANISRAQKELGYMPTTDLEGGLKKFVRWYLDFYSPLKNKSVW* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4086 427 Pfam NAD dependent epimerase/dehydratase family 89 327 IPR001509 -
Psa2g4086 427 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 86 419 IPR036291 -
Psa2g4086 427 PRINTS Nucleotide sugar epimerase signature 115 131 - -
Psa2g4086 427 PRINTS Nucleotide sugar epimerase signature 305 320 - -
Psa2g4086 427 PRINTS Nucleotide sugar epimerase signature 340 355 - -
Psa2g4086 427 PRINTS Nucleotide sugar epimerase signature 380 397 - -
Psa2g4086 427 PANTHER EPIMERASE-RELATED 3 425 - -
Psa2g4086 427 Gene3D - 87 419 - -
Psa2g4086 427 PANTHER UDP-GLUCURONATE 4-EPIMERASE 5 3 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4086 Psa-Chr2 418676903 418679633 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g4086 1 419 Miscellaneous Gene Families AT4G00110 73.131 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4086 K08679 - gmx:100803127 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4086 2 418676903 418679633 Psa2g4086 2 418676903 418679633 ECH