Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4070 ATGGCGCAAATCGATGACTCTAACGATATAGCTTATTCTTATGTTCCCGTACCCCGTGGACCTCACGCCGGTGAATCTCCGGCGGAGAGTCGGGGAAAATTGAAGGCGGGGGTTGCGATCGTTTGTGGATTGTTATTGCTAGCTTCCTTAGTAGCATACAATGGCTACAGTGAATCTAATAAAAAAAGAGATGAGTTATATTCAACGTTAAAATCTCATTCAAATGAAGATAAAAATAAAACAATAACTTTTCAGAAATGGATGCCAGTTTCACGAGGTGTATCTGCAGGAGTTTCAGAGAAATCCAATGGCATGTTCCAAACCAACACCAATTTACAAACTTATCCTTGGAATGATAACGTGCTATCATGGCAGAGAACCGCTTTTCATTTCCAACCGAAACATAATTGGATGAATGATCCTAACGGTCCGTTGTACTACAAGGGTCGGTATCATTTTTTCTATCAATACAATCCAAATGGCGCGGTTTGGGGTGACATAGTATGGGGACATGCAGTCTCAAAAGACTTGGTTCGTTGGCTTCATCTTCCACTAGCAATGGTAGCAGATGAATGGTATGATCGAAATGGTGTGTGGACAGGTTCTGCTACAATATTACCAAATGGTGAACTCGTCATGCTATACACCGGTGCCACGAATGAATCAGTACAAGTACAAAACCTTGCGTACCCTGCCAACAGTTCGGATCCGCTCCTACTTAATTGGACCAAATACTCGGGAAATCCTGTTCTGGTCCCGCCCCCGGAAGTTAATGTCATTGATTTTCGTGATCCGACTACCGCTTGGCTTACCTCTCAAGGTAAATGGCGTATTTCAATTGGTTCTAAGCTTAACGAAGCCGGCGTAGCTTTGGTTTATGATACCAAAGATTTCAAGACTTTTGAACGTGTGGAGGGTATGCTTCGTCGTGTGGAAGATACTGGAATGTGGGAGTGTGTTGATTTTTTCCCCGTGTCAACTGAGTTGGATAATGGATTGGATACTTCTGTTAATAATCCTAGTGTTAAACATGTGATGAAGGTTAGCTTGGATGATGAAAGACATGATTATTACGCTATTGGAACTTATAATGAAAGTATTACTGATTTCCTGCCCGATGATATTAGTAAAGATGTTGGTATTGGATTAAGGTATGATTATGGTGTATTTTATGCTTCCAAGACATTTTATGACCAAAGTAAAAAGAGAAGAGTGTTGTGGAGTTGGATTGCTGAGTCTGATAGTGAATATGTTGATGTTGCCAAAGGTTGGGCATCACTTATGGGTATTCCGAGGACAGTGCTACTTGACAAAAAAACGGGTAGCAACTTACTTCAATGGCCGGTTGAGGAGGTGGAGAGTTTGAGAATGCATAGTGACAAGTTTGAAAATTTGACGGCGAAGCCAGGGTCAATTGTATCACTAGATATTCCAGCAGCAAATCAGTTGGACATTGTAGCCGAGTTTAGTATTGATAAAGAAGCTATAAACAAGACAATGGAAACCGATATGGAGTACGATTGTGAAACTAGTGGTGGAGCTGCTGCTCGTGGCGCGTTAGGACCTTTTGGTGTATTGGTTCTAGCAAATGATGGTCTTTATGAATATACTCCTATTTACTTTTATGTTGTTAAAGGAAGAGATGGAAATCTCAAAACTTCTTTCTGTTCAGATCAATCCAGGTCTTCTTTGGCAACTGATGTTGAAAAGAAAATCTTTGGAAGCTTTGTTCCTGTACTTCAAGATGAGAAGCTATCTCTAAGAATATTGGTGGACCATTCTATAATTGAAAGCTTTGCTCAAGGTGGAAGAACATGTGTGACTTCTAGGGTTTATCCAACAAAAGCAATCTATGGAGATGCTAGATTGTTCTTGTTCAATAATGCTACTGAGGCCACTGTTAATGCCTCAGTCGAAGTTTGGCAGATGAATTCTGCATCCATAAAGCCATTTCAATATGAACAAATGAATTAA 1974 0.4048 MAQIDDSNDIAYSYVPVPRGPHAGESPAESRGKLKAGVAIVCGLLLLASLVAYNGYSESNKKRDELYSTLKSHSNEDKNKTITFQKWMPVSRGVSAGVSEKSNGMFQTNTNLQTYPWNDNVLSWQRTAFHFQPKHNWMNDPNGPLYYKGRYHFFYQYNPNGAVWGDIVWGHAVSKDLVRWLHLPLAMVADEWYDRNGVWTGSATILPNGELVMLYTGATNESVQVQNLAYPANSSDPLLLNWTKYSGNPVLVPPPEVNVIDFRDPTTAWLTSQGKWRISIGSKLNEAGVALVYDTKDFKTFERVEGMLRRVEDTGMWECVDFFPVSTELDNGLDTSVNNPSVKHVMKVSLDDERHDYYAIGTYNESITDFLPDDISKDVGIGLRYDYGVFYASKTFYDQSKKRRVLWSWIAESDSEYVDVAKGWASLMGIPRTVLLDKKTGSNLLQWPVEEVESLRMHSDKFENLTAKPGSIVSLDIPAANQLDIVAEFSIDKEAINKTMETDMEYDCETSGGAAARGALGPFGVLVLANDGLYEYTPIYFYVVKGRDGNLKTSFCSDQSRSSLATDVEKKIFGSFVPVLQDEKLSLRILVDHSIIESFAQGGRTCVTSRVYPTKAIYGDARLFLFNNATEATVNASVEVWQMNSASIKPFQYEQMN* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4070 657 Pfam Beta-fructofuranosidase, N-terminal domain 13 122 IPR021792 GO:0004564
Psa2g4070 657 Pfam Glycosyl hydrolases family 32 N-terminal domain 130 448 IPR013148 -
Psa2g4070 657 Gene3D - 460 643 - -
Psa2g4070 657 CDD GH32_Fruct1-like 136 436 - -
Psa2g4070 657 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 33 652 - -
Psa2g4070 657 SUPERFAMILY Arabinanase/levansucrase/invertase 123 449 IPR023296 -
Psa2g4070 657 Pfam Glycosyl hydrolases family 32 C terminal 451 642 IPR013189 -
Psa2g4070 657 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 33 652 - -
Psa2g4070 657 Gene3D Glycosyl hydrolase domain; family 43 135 459 IPR023296 -
Psa2g4070 657 ProSitePatterns Glycosyl hydrolases family 32 active site. 130 143 IPR018053 GO:0004553|GO:0005975
Psa2g4070 657 SUPERFAMILY Concanavalin A-like lectins/glucanases 448 646 IPR013320 -
Psa2g4070 657 SMART glyco_32 130 603 IPR001362 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4070 Psa-Chr2 418356519 418360622 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g4070 12 656 Glycoside Hydrolase AT1G12240 60.213 0.0 803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4070 K01193 - gmx:100798772 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4070 2 418356519 418360622 Psa2g4070 2 418356519 418360622 ECH