Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4040 ATGAAGCTTCTGCGTCTTCCTCCTCTCGCTTCTCTCTTGATCTTCTTCTTCGTTTTCCCCATTTCACACTCAATACCATTCATTGTTCTTCACGGAATTTCTGATGAGTGCTCTAGTCATGGAGTCAAATCATTCACGGAGAAATTGATCAGTTACTCTGGTGTTCAGGGATTTTGCGTGGAAGTAGGCAATGGATCATGGGATTCATGGTTTATACCTTTGCAAGAGCAGACAGATATTGTTTGCCAGAAGGTGAAGGAAATGAAAGAATTGAAAGGAGGATACAACATTGTGGGACTCTCCCAGGGAAATTTGATCGGTCGAGGTGTGGTCGAGTTTTGTGAAGGAGGACCTCCCGTTAAGAACTTTATCTCTTTAGCAGGCCCTCATGCTGGTACTGCTTCAGTTCCCCTGTGTGGTACAGGTGTCTTTTGTGTCATTGCAGACAATCTCATCAAGGGAGAGGTTTATAGTAGCTATATTCAAGTATTCATCTCTATCTTCTATTTGCTTTGCCCAGAATTTGTTATATCATTACTTTGTCACTCATTATTTTTTTGCTCCCACTTCACAATCTCTAACATGCCCCAATTCAAAAAATTGCAGGAACACTTGGCTCCTAGTGGATATCTTAAATTACCAAATGCTTTACCCAAATACTTGGAGAACTGTAGGTACCTCCCTAAGCTTAATAATGAAAAACCTGGTCAGAGGAATTCCACTTACAAGGAAAGATTTAGTAGCTTAAAGAATTTGGTACTTATCATGTTTGAGCAAGATACAGTTTTAATACCTCGAGAAACATCCTGGTTTGGTTATTATCCAGATGGCTCCTTCAAGCCAACATTACCACCGCAAAAGACAAAACTCTACACTGAAGATTGGATTGGATTGAGAACTTTAGACAATGCTGGCCGCGTCCATTTCATTAGTGTTCAGGGAAAACATCTGGGAATATCAGATGCAGATATGAAGAAACATGTAGTGCCATATTTGAACGAAACATCAAGAGAAGATAGAGCTACTGAGGCTGGCTTTCGAAGGATGCGTGAAGTTAACCGAAGATTTATTCAATTTAACAGGATGGTGTAA 1092 0.4029 MKLLRLPPLASLLIFFFVFPISHSIPFIVLHGISDECSSHGVKSFTEKLISYSGVQGFCVEVGNGSWDSWFIPLQEQTDIVCQKVKEMKELKGGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFISLAGPHAGTASVPLCGTGVFCVIADNLIKGEVYSSYIQVFISIFYLLCPEFVISLLCHSLFFCSHFTISNMPQFKKLQEHLAPSGYLKLPNALPKYLENCRYLPKLNNEKPGQRNSTYKERFSSLKNLVLIMFEQDTVLIPRETSWFGYYPDGSFKPTLPPQKTKLYTEDWIGLRTLDNAGRVHFISVQGKHLGISDADMKKHVVPYLNETSREDRATEAGFRRMREVNRRFIQFNRMV* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4040 363 SUPERFAMILY alpha/beta-Hydrolases 190 332 IPR029058 -
Psa2g4040 363 Pfam Palmitoyl protein thioesterase 26 316 - -
Psa2g4040 363 Gene3D alpha/beta hydrolase 20 344 IPR029058 -
Psa2g4040 363 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 8 173 - -
Psa2g4040 363 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 201 344 - -
Psa2g4040 363 PANTHER PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 201 344 - -
Psa2g4040 363 PANTHER PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 8 173 - -
Psa2g4040 363 SUPERFAMILY alpha/beta-Hydrolases 22 168 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4040 Psa-Chr2 416922753 416927043 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g4040 1 332 Acyl Lipid Metabolism Gene Families AT3G60340 57.229 1.41e-139 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4040 K01074 - gmx:100809770 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4040 2 416922753 416927043 Psa2g4040 2 416922753 416927043 ECH