Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4009 ATGGCTTCTCAAGTTTTTCTTCAGGCTCTGTTTTCCCCTACTCAATCTCTTCCGAACAAGCTATGTTTCTCCTCTTCTTCTTGCTCCGCTTCCACATTCGGTTCTCGTAACTTGCCGTTGATTTCAACCTCAATTTCACGGCGCTGCAGTCCTCTCAATGCTAAACCTACTTTTGTTGTCAGAGCTGATTCCAATCCCGACGCTGCTTCCGCTTCGGATGTTGTGGATGAAGTTCCGGAAACTGATGCTGAAAAGGTTTCGGAATCTGATTTAGAGGTTGAACAATTGAAGCCACCGAGACAAACTCGGGTCAAGCTTGGTGATGTTATGGGGATATTGCATAAGAGGGCAATTGAAGCTTCGGATGAAGTGAGAGCCACTCCTGACATTAGGCCTGGAGATATTGTTGAAATCAGATTGGAAGTTCCCGAGAACAAGCGGAGGTTATCTATTTACAAAGGTATTGTAATCTCAAGACAAAATGCTGGTATTCACACGACTATTCGAGTCCGAAGAATTATTGCTGGCACAGGTGTTGAGATAACCTTCCCTCTGTACTCTCCAAACATCAAAGAAATCAAAGTGGTAAAGCACCGAAAGGTTAGGAGGGCAAAATTGTACTATCTAAAACACAAGCTTCCCAGATTCTCCACTTTCAAATGA 663 0.4374 MASQVFLQALFSPTQSLPNKLCFSSSSCSASTFGSRNLPLISTSISRRCSPLNAKPTFVVRADSNPDAASASDVVDEVPETDAEKVSESDLEVEQLKPPRQTRVKLGDVMGILHKRAIEASDEVRATPDIRPGDIVEIRLEVPENKRRLSIYKGIVISRQNAGIHTTIRVRRIIAGTGVEITFPLYSPNIKEIKVVKHRKVRRAKLYYLKHKLPRFSTFK* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4009 220 MobiDBLite consensus disorder prediction 69 93 - -
Psa2g4009 220 MobiDBLite consensus disorder prediction 78 93 - -
Psa2g4009 220 SUPERFAMILY Translation proteins SH3-like domain 116 220 IPR008991 -
Psa2g4009 220 Pfam Ribosomal protein L19 118 213 IPR001857 GO:0003735|GO:0005840|GO:0006412
Psa2g4009 220 PRINTS Ribosomal protein L19 signature 114 143 IPR001857 GO:0003735|GO:0005840|GO:0006412
Psa2g4009 220 PRINTS Ribosomal protein L19 signature 173 196 IPR001857 GO:0003735|GO:0005840|GO:0006412
Psa2g4009 220 PANTHER 50S RIBOSOMAL PROTEIN L19-1, CHLOROPLASTIC-RELATED 13 220 - -
Psa2g4009 220 Gene3D - 108 218 IPR038657 -
Psa2g4009 220 PANTHER RIBOSOMAL PROTEIN L19 13 220 IPR001857 GO:0003735|GO:0005840|GO:0006412
Psa2g4009 220 TIGRFAM rplS_bact: ribosomal protein bL19 118 212 IPR001857 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4009 Psa-Chr2 415457331 415459838 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4009 K02884 - gmx:100500328 247.284